Desulfonema limicola: dnl_15870
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Entry
dnl_15870 CDS
T07101
Name
(GenBank) Putative general secretion pathway II protein, GspE-like
KO
K02652
type IV pilus assembly protein PilB
Organism
dli
Desulfonema limicola
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
dli02044
]
dnl_15870
02035 Bacterial motility proteins [BR:
dli02035
]
dnl_15870
Secretion system [BR:
dli02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
dnl_15870
Bacterial motility proteins [BR:
dli02035
]
Pilus system
Pilus assembly proteins
dnl_15870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
B129_C2H2-zf
AAA_14
AAA_22
nSTAND3
AAA_7
AAA_11
AAA
ABC_tran
DUF87
DUF4388
cobW
NTPase_1
AAA_16
Pox_A32
ResIII
AAA_30
Rap-GAP_dimer
Microtub_bd
AAA_19
ATPase_2
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QTA79325
UniProt:
A0A975B5U8
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All DBs
Position
1702189..1703886
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AA seq
565 aa
AA seq
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MKIRLGDILLKQSIITQEQLDNALKEQKKTGLKLGQVLTIRGLINELQVVNMLCEQLNIE
RFRPEAYPPDQSLSKLISADIVKTHQVVPVKLEGNLLSLAMVDPLDIEAIDFIEDHIEKE
VKVIVCAEQELNELVRHIYGANLGINEFIDTIHNPEDMAEENVWAGNPDLEVGKLRGMAQ
EAPVVRLVNEILSQAAREGASDVHISPEKDTIQVRFRIDGKLHDIPSPPKSLILPILSRL
KLLASMDIAILRTPQDGRFTVKMNHREINIRASTIPTIYGENLVLRLLDTSSGVFSLNQI
GMSESDIQKTESALNKPYGMILSTGPTGSGKTTTLYSILKDLNKPDVNIITLEDPVEYRV
DKIRQTQLNRKAGMTFASGIRSILRQDPDVIMVGEIRDSETAGIAVQSALTGHKVLSTLH
TNNAAGAITRFLDMGIAPFLLSSVLLILIAQRLVRQVCPVCKKAFEPTDAALKYWGIDKD
NSMNCVQAAGCFNCMNTGYKGRTGIFEVLLIDEMIQDMIIRNKAAHEITLAAQRIGKLNT
LKDNAAEKVRSGLTTMEEASSVVMI
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataaggcttggtgatattttattaaaacaaagcattattactcaagaacagctt
gacaatgcattaaaagaacaaaagaaaactggattgaagctgggacaggtactgactatc
agaggtcttattaatgaactgcaagttgttaatatgctttgtgaacaattaaacatagag
cgattcaggcccgaagcatatccgcctgatcaaagtctcagtaaattaatatcagcagat
attgttaaaacacatcaggtagtacctgtaaaattagaaggtaatttactttctcttgcg
atggtagatcctcttgatattgaggcaattgattttattgaagatcatattgaaaaagaa
gtaaaggtaattgtttgtgcagaacaggaactaaatgaacttgttcgtcatatatatgga
gcaaatcttggtataaatgaatttattgatactattcataatcctgaagatatggcagaa
gaaaatgtttgggcaggaaatcctgatcttgaggtaggcaagttaaggggtatggctcaa
gaagcacctgttgtacgcctggtaaatgaaattttatcccaggcagcccgtgaaggagcc
agtgatgttcatataagccctgaaaaagatactattcaggtaagatttcgtatagatgga
aagcttcatgatattccatcacctcccaaaagtctcattttacccatattatcaaggctt
aagctgctggcaagtatggatattgcaatcctcagaactccccaggacggcaggtttact
gtaaaaatgaatcacagggagataaatataagggcttctaccatacctactatatatggt
gaaaatcttgttctccgtcttcttgatacaagcagcggggttttttccctgaatcagatt
ggaatgtctgaatctgatattcaaaaaaccgaatcagctttaaataaaccttatggcatg
attttaagtacaggtcccacaggaagcggaaaaacaactactttatattctattttaaaa
gacttgaacaagcctgatgtaaatattattacccttgaagatcctgtggaatatcgtgtt
gacaagataagacagactcagctaaatcgtaaagcaggtatgacctttgccagtggaata
agatcaatacttcgccaggaccctgatgttataatggttggagaaatcagggacagtgaa
acagcgggtattgctgtgcagtctgctctcacaggacataaggtgttaagcacacttcat
accaataatgcagcaggagctattaccaggtttttggatatgggtatagccccgtttctt
ctttcttctgttttattaatattaattgcccagcgcctggtccggcaggtatgtccagtt
tgcaaaaaagcttttgaaccaactgacgcagctttaaaatactggggtattgataaagat
aacagtatgaattgtgtacaggccgcaggatgttttaattgcatgaacacaggttataaa
ggcagaacaggtatttttgaagtactgcttattgatgaaatgattcaggatatgataata
agaaataaagcagctcatgaaatcactctcgcagcccagagaattggaaaactcaatacc
ctgaaagacaatgctgctgaaaaagtaagatcaggcctgacaacgatggaagaagccagt
tcagttgtcatgatctga
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