Desulfonema limicola: dnl_16810
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Entry
dnl_16810 CDS
T07101
Name
(GenBank) TonB-dependent receptor
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
dli
Desulfonema limicola
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dli02000
]
dnl_16810
Transporters [BR:
dli02000
]
Other transporters
Pores ion channels [TC:
1
]
dnl_16810
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Big_10
DUF6396
Motif
Other DBs
NCBI-ProteinID:
QTA79411
UniProt:
A0A975B5X2
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All DBs
Position
complement(1796630..1798792)
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AA seq
720 aa
AA seq
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MVKYIKIFIILIFSFASISFASISFASVDFVLSQEYPLSSVYSEIDEELKWLKEEAVETT
EIATKTKMDADLVPGMVTILSREQLEKQGIRTVFEALPLVPGITTLMTGMGEPIVSVRGI
GGTFFSGNMKLMLDGVAMNEALSAAGYALYQIPVEQIERIEIIRGPGSVIYGEYAYAGVI
NVITRKTGNRIFAGYDTNKGYGGGAAAAYSLPEKDFNISLSMAGWKTDGPDVQAGEDRLY
GMGLGYFSNSPGSTNEFGRDKMANLSLEYKDFSAKGQYLSTERGDYYGIIGILPVSEDRS
RQLNQHMAFEANQRLNFFSSLTTDLKAGFRNYEFEIDDIVALPPITIPLPDGSIYQMTPP
DGSIAGPYYEERELYAGTEFIWDGINNNTILLGLKYSDIKMEDVWVDTNTGDMTPGVMTR
LTGEYNWLLEDQSRKVFSVYLQDLYRITDNFTLTPGLRYDNYNDMGEYITPRLSAVWQPA
KSHILKAQYSEAYRPPTFTELYARQNSVVMGNSELEAEHIRSYELGYTFRLGKTAAHITL
FRSELTDNIEYPVYADPFAGEAIQYQNADETITSQGVELEFNHNLMDDLAMNLNISFADT
NDSKTDEPITGAVDWLGNLGLVYRPANYCTLGFKYNYVGKRHRTPDDSRGDIDAYDSVDL
TGIITHKGLTWGAGITNIFNSNIVYPAPVYKDESGNMGYTYEEDFQRPGRKFWVRLSYDF
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaatacataaagattttcattatactcattttttcttttgcatctatttctttt
gcatctatttcttttgcatctgttgattttgtattgtcacaggagtacccgctgtcaagt
gtatattctgagattgatgaagaactaaagtggcttaaagaagaggctgttgaaactact
gagattgctaccaaaacaaaaatggatgctgatcttgttcccggaatggtgacgatattg
agcagagagcagttggaaaaacaagggataagaaccgtatttgaagcccttcccctggtt
ccgggcataactactcttatgacaggtatgggagagcccattgtttcagtcagggggatc
ggaggaacctttttttcaggaaatatgaaacttatgcttgacggggttgccatgaatgaa
gcccttagtgctgccggatatgctctgtatcagattcctgtggaacaaattgaaaggata
gaaatcatacgcgggccaggttcggttatttacggagaatatgcttatgcaggtgttatc
aatgtaataacccgaaaaaccggaaaccggatatttgcaggttatgatactaataaaggt
tacgggggaggggcagccgcagcatattccctgcctgaaaaagattttaatatcagtctc
agcatggccggatggaaaaccgacggccctgatgtacaggccggtgaagaccggctttat
ggcatggggcttggatatttttccaattctccgggttccacaaatgaatttggcagggat
aaaatggctaacctttcactggaatataaggatttttcagcaaaaggccagtatctttca
actgaaagaggcgattattacggaattatcgggattttgcctgtcagtgaagaccgaagc
agacaattaaatcaacatatggcttttgaagcaaatcagaggctgaattttttttcatct
ttaacaaccgatctaaaagccggatttcgtaattatgaatttgaaattgatgatattgtt
gcacttccgcccataaccatccccctgcctgacggttcgatttatcaaatgactccgcct
gacggatctattgcaggcccttactatgaagaaagagaactctatgcaggaacggaattt
atatgggatggaataaataataatacaatacttctgggcctgaaatattctgatattaaa
atggaagatgtttgggttgataccaataccggcgacatgaccccaggagtaatgacgcgc
cttacaggagagtataactggcttcttgaagatcagtcaagaaaggtgttcagtgtttat
ctccaggatttgtacaggatcacggacaactttaccctgactccggggctgcgttatgat
aattacaatgacatgggagaatacataacaccaaggctttcggcagtatggcagcctgcc
aaatcccatattttaaaagcgcaatattccgaagcatacagaccgcctacctttacggaa
ttatacgccaggcagaattcagtagtaatgggcaattctgagctggaagcggagcatatc
agaagttatgaactcggttatactttcagacttggaaaaactgccgcacatattaccctg
tttcgctcagaactgacagacaacattgaatatcccgtatatgcagatccctttgccggt
gaggccatacaatatcaaaacgctgatgaaacaattacatcccagggtgttgaactggag
tttaatcataatctcatggatgatctggcaatgaatttaaatatttcttttgcagataca
aatgacagcaaaacagatgaacccattacaggtgctgttgactggcttggaaatctcggc
cttgtttacagacctgccaattactgcactttgggttttaaatataattatgtgggcaaa
aggcacagaaccccggatgacagcaggggagatatagatgcttatgacagtgttgatctc
acaggaattataacacacaaaggtcttacatggggtgcaggtattacaaatatatttaac
agcaatattgtttatcctgctcctgtttataaagatgaatcgggaaatatgggttatacc
tatgaggaagatttccagagacccgggagaaaattctgggtccggctttcttatgatttt
taa
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