Desulfonema limicola: dnl_17650
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Entry
dnl_17650 CDS
T07101
Symbol
glyA
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
dli
Desulfonema limicola
Pathway
dli00260
Glycine, serine and threonine metabolism
dli00460
Cyanoamino acid metabolism
dli00630
Glyoxylate and dicarboxylate metabolism
dli00670
One carbon pool by folate
dli00680
Methane metabolism
dli01100
Metabolic pathways
dli01110
Biosynthesis of secondary metabolites
dli01120
Microbial metabolism in diverse environments
dli01200
Carbon metabolism
dli01230
Biosynthesis of amino acids
dli01240
Biosynthesis of cofactors
dli04981
Folate transport and metabolism
Module
dli_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
dnl_17650 (glyA)
09102 Energy metabolism
00680 Methane metabolism
dnl_17650 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
dnl_17650 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
dnl_17650 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
dnl_17650 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
dnl_17650 (glyA)
Enzymes [BR:
dli01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
dnl_17650 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
QTA79494
UniProt:
A0A975B656
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All DBs
Position
1896112..1897386
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AA seq
424 aa
AA seq
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MELNIIEKADPELFKAIAEELYRQKNTLELIASENIVSRAVMAVQGSVLTNKYAEGYPDK
RYYGGCEFVDIAEKLAIERAKEIFGADYVNVQPHSGSQANMAVYFSLLEYKDTVLGMDLS
HGGHLTHGSPASFSGKFFNFIHYGVNKDTGTIDYDALESLAKKHKPRMIVAGASAYPRIL
DFKRLSETAKSVGAFFMVDMAHIAGLVAAGLHPSPVPFADVVTSTTHKTLRGPRGGLILA
KKDYGKKIDTNIFPGIQGGPLMHIIAAKALAFNDAKTLSFKEYQKDIVKNAGVLAERLME
KGINLVSGGTDNHMMLADLRNLGITGKQAQDILESTGITVNRNSIPFETQGPFVTSGIRI
GTPAITSRGMRSAHMLLIADLIVDVLKNPNNEKIKNKVKADVRKLCNDFPIYPDLVCPDL
EGSS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
ttggaattaaatattattgaaaaggcagaccctgagctgttcaaagctatagcagaagaa
ttgtacagacagaaaaatacccttgaactgattgcatctgaaaatattgtaagccgggca
gttatggctgttcaaggcagtgttcttacaaataaatatgcagaaggctatcctgataaa
agatattatggaggatgtgaatttgttgatattgcagaaaagcttgctattgaacgggca
aaagagatttttggtgctgattatgttaatgttcagccccattcaggttcccaggcaaat
atggctgtttatttctcccttctggaatataaagacacagtacttggaatggatctgtcc
catggaggccatttaacccatggcagtcctgccagtttttcaggaaaattttttaatttt
atccattacggagtcaacaaagatactggtaccattgattatgatgcacttgagtccctg
gcaaaaaaacataagccccgcatgattgtagcaggtgcaagtgcatacccgcgtattctg
gattttaaaaggttgtcagagactgcaaaatctgttggtgctttttttatggttgacatg
gctcatattgcaggtctggttgctgccgggcttcacccatcccctgttccttttgcagat
gttgtaacatcaacaacccataaaaccttaagaggtccaagagggggtctgattctggca
aaaaaagattatgggaaaaaaattgacactaatatatttccaggtattcagggcggccct
cttatgcacatcattgctgcaaaggcattggcttttaatgatgccaaaaccctgtccttt
aaagaatatcaaaaagatattgtaaaaaatgcaggggttctggcggaacggctcatggaa
aaagggattaacctggtatcagggggtacagataatcacatgatgctggctgatcttaga
aatcttggcataacaggaaagcaggctcaggatatattggaaagcacaggcataacagta
aacagaaattccattccttttgaaacccaggggccttttgtaacaagcggtattcgtatt
ggtacacctgctataacatccagaggaatgaggtctgctcacatgctgcttattgctgat
ttaatagttgatgttctgaaaaatccaaataatgaaaaaataaaaaacaaagtcaaggca
gatgtcaggaaattgtgtaatgattttcccatttatcctgacctggtttgtcctgatttg
gaaggcagcagctaa
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