Desulfonema limicola: dnl_17730
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Entry
dnl_17730 CDS
T07101
Symbol
trpB1
Name
(GenBank) Tryptophan synthase, subunit beta
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
dli
Desulfonema limicola
Pathway
dli00260
Glycine, serine and threonine metabolism
dli00400
Phenylalanine, tyrosine and tryptophan biosynthesis
dli01100
Metabolic pathways
dli01110
Biosynthesis of secondary metabolites
dli01230
Biosynthesis of amino acids
Module
dli_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
dnl_17730 (trpB1)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
dnl_17730 (trpB1)
Enzymes [BR:
dli01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
dnl_17730 (trpB1)
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Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
QTA79502
UniProt:
A0A975B684
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All DBs
Position
1902562..1903938
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AA seq
458 aa
AA seq
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METRKIFLNEDEMPRQWYNILADIKMNPPLGPDGNPVKPEDLAPVFPMNLIEQEVSTDRW
IDIPEKVLDVLSIWRPSPLVRAISLEKALDTPAKIYFKNESLSPPGSHKPNTAVPQAYYN
KVFGIEKLTTETGAGQWGSALSFACSQFGLECRVYMVRVSFDQKPYRKSMMETWGGKCIA
SPSMETKAGRDALEKDPNTPGSLGTAISEAIEVAVSDQTGKTRYSLGSVLNHVMLHQTII
GLEAKKQFEKAGDYPDIVIGCAGGGSNFAGLAFPFVLDKINGKQIEILPVEPAACPTLTK
APFVYDHGDTAGYTPLLPMHSLGHAFVPPPLHAGGLRYHGMAPTVSQIVSEGLASPRSVT
QLEAYEAGILLARTEGIIPAPETTHALACVIDEARKAKEEGREKTIVFSWSGHGLLDLGT
YDKFLSGSLHNFVLSDEELAKAEKIFENYPKPSLLKSF
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccagaaaaatttttttaaatgaagatgaaatgccccgccagtggtataatatt
ctagcggatattaagatgaatccccctttagggcctgatggtaatcctgttaaaccagaa
gaccttgcccctgtatttcccatgaatcttattgagcaggaagtaagcactgacagatgg
attgatatacctgaaaaagtacttgatgttctgtccatatggcggccttcaccccttgtc
agggcaatctcccttgaaaaagctttggatacccctgctaaaatatattttaaaaatgaa
agtctcagtcctccaggcagccataagccaaatactgcagtgccccaggcatattacaat
aaggtttttggcatagagaaacttacaacagaaaccggtgcaggccagtggggaagcgcc
ctgtcttttgcctgttcccagtttggtcttgaatgcagggtttatatggtcagggtaagc
tttgaccagaaaccataccggaaatccatgatggaaacatggggaggaaaatgtattgcc
agccccagcatggaaacaaaagcaggaagggatgcccttgaaaaagacccaaataccccg
ggaagcctgggaactgcaatcagcgaggctattgaagttgcagtttcggatcaaacaggc
aaaaccaggtattcacttggaagtgttttaaatcatgtaatgcttcatcagactataatc
ggtcttgaagcaaagaaacaatttgaaaaggctggcgattatcctgacattgttatagga
tgcgcaggaggcggaagcaattttgcaggtcttgcctttccctttgttttagataaaatc
aatggaaaacagattgagatactcccggttgaaccggctgcctgtccaacattgaccaaa
gctccttttgtttatgatcatggcgatacagcaggttataccccgctgcttcccatgcac
agtttaggtcatgcttttgtgcctcctccccttcatgcaggaggtcttaggtatcatgga
atggctcctactgtaagccagattgtttccgaaggactggcttccccgcgttctgttacc
cagctcgaagcttatgaagccggcattcttttagccagaacagaaggaattattccagcc
cctgaaaccacccacgcccttgcctgtgttattgacgaagccagaaaggcaaaagaagaa
ggcagggaaaaaacaatagttttcagctggagcggacacgggctgcttgatcttggcaca
tatgataaattcctttcaggctctctgcataattttgttttaagtgatgaagaactggca
aaagctgaaaagatatttgaaaactatccaaaaccgtctcttctcaagagcttctga
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