KEGG   Desulfonema limicola: dnl_17930
Entry
dnl_17930         CDS       T07101                                 
Symbol
hup1
Name
(GenBank) DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
dli  Desulfonema limicola
Brite
KEGG Orthology (KO) [BR:dli00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dli03032]
    dnl_17930 (hup1)
   03036 Chromosome and associated proteins [BR:dli03036]
    dnl_17930 (hup1)
   03400 DNA repair and recombination proteins [BR:dli03400]
    dnl_17930 (hup1)
DNA replication proteins [BR:dli03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    dnl_17930 (hup1)
Chromosome and associated proteins [BR:dli03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    dnl_17930 (hup1)
DNA repair and recombination proteins [BR:dli03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      dnl_17930 (hup1)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_1 HU-CCDC81_euk_2
Other DBs
NCBI-ProteinID: QTA79522
UniProt: A0A975B686
LinkDB
Position
1920688..1920957
AA seq 89 aa
MKKDDIINELAKVLNSKKDAKTALESLITCITEALKRGEKVTLTGFGTFDVNDRKARKGR
NPQTGEPIDIKASRVPRFAAGKTLKNALN
NT seq 270 nt   +upstreamnt  +downstreamnt
atgaaaaaagatgatattataaatgaactggcaaaggttcttaattcaaaaaaagatgca
aaaactgctttggaaagccttataacatgtattaccgaagcattgaaaagaggggaaaag
gttactctgacaggatttggaacctttgatgtaaatgatagaaaagctagaaaaggaaga
aatcctcaaactggagaacctattgatatcaaggcatcaagagtaccccgttttgctgcc
ggcaagaccttgaaaaatgctttgaactaa

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