Desulfonema limicola: dnl_23670
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Entry
dnl_23670 CDS
T07101
Name
(GenBank) ABC-type dipeptide transport system, periplasmic component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
dli
Desulfonema limicola
Pathway
dli02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
dnl_23670
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dli02000
]
dnl_23670
Transporters [BR:
dli02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
dnl_23670
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Aminotran_3
Motif
Other DBs
NCBI-ProteinID:
QTA80081
UniProt:
A0A975GGA3
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Position
2569599..2571332
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AA seq
577 aa
AA seq
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MPVPSYYYYLPGCNLFIPKLCKAAQNYDFEKINKGENKMNKKMLCLVTIFMLIAAGNSGF
TLSECAAAGNETILNEPKHGGELVIGMVNFPAHLNPAIHSGNYTGMPGNQLFASPLRYDD
KWNPRPYLAEKWEVSQDGLSVTLNLVKDAVFHDGKPVTSEDIAFSVMTVKNNHPFNTMFA
PVEKVETPDPHTAVICLSRPHPAILLAMSSSLLPVLPKHIYGDGRDIRTHPANMAPIGSG
PFKFVEFIPGQHILLERSDKFFIKDRPFLDKIRYKMFKIFDHLALAGGEVHIIPFYDNPF
STQLFENEKNLVSTTKGYEAIGPLYWFAFNIRKKPFDDIRVRQAIAYCIDRKFIAEKLFG
KKITEATGPIVPDSPFYSADVKQYEVDVKKANDLLDQAGYHRDKTGKRFKAVMDFLPANP
EMFITLMEYVRDDVMRKIGVDLVIRETEHFPQWAEIVSNGNFELTYDTVFNWGDPVIGVH
RTYDCNNIRKGVIWSNTQGYCNPKVNELMEAAAQEMNFEKRKALYAEFQKIVVHDLPILF
LTKVPYVTLHNKNLAGLNDSIWGLLSPLDQVYWKEKP
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgttccctcatattactattacctgccagggtgtaatcttttcattccaaaactt
tgcaaagcagcccagaattatgattttgagaaaataaacaaaggagaaaacaaaatgaac
aaaaaaatgttatgtctggttactatttttatgcttattgcagcaggaaactccggtttt
acgctgtcagaatgtgcggctgccggaaatgaaaccattttaaatgaaccaaaacacggc
ggggaactggtaatcggaatggtcaattttccagctcacctgaaccctgcaatccattcc
ggcaattatacaggtatgcccggcaaccagctctttgcatcacccctgagatatgacgac
aaatggaacccccggccctatcttgctgaaaaatgggaagtttcccaggacggtctttct
gtaaccctgaatcttgtcaaagatgctgtttttcatgatggaaaaccggttacatcggaa
gatattgccttttctgttatgactgttaagaataatcatccctttaataccatgttcgca
cctgtggaaaaagtagaaacccctgatccccatacagcagtcatatgccttagcagaccc
catcctgcaatccttctggcaatgtcgtcttccctgctgcctgttcttcccaaacatatt
tacggagacggcagggacataagaacccatcctgccaatatggctccgataggttccggt
ccctttaaatttgtggaatttatcccggggcagcatatacttttagaacgcagtgataaa
ttttttatcaaagaccggccttttcttgataaaatccgttataaaatgtttaaaatcttt
gatcacctggctcttgcaggcggggaagttcatataattcctttttacgacaatcctttc
agcacccagttgtttgaaaacgagaaaaacctggtttcaacaactaaaggatatgaagca
atcggccctctgtactggtttgcattcaacattagaaaaaagccttttgacgacatccgt
gtccgccaggcaatagcctattgtattgacagaaaatttattgcagaaaaactgtttggg
aaaaaaataacagaagctacgggtcccattgtgccggacagccctttttattcggcagat
gtaaagcagtatgaggttgatgtaaaaaaggcaaatgatctgctggatcaggcaggatac
cacagggacaaaaccggcaaacgctttaaggctgtaatggattttcttcctgcaaatcct
gagatgtttattacccttatggaatatgtaagagacgatgttatgcggaaaatcggggtt
gatctggttatccgggaaaccgaacattttccccaatgggcagagattgtttcaaacggt
aattttgagctgacctatgacacggtctttaactggggtgacccggttatcggtgttcac
aggacttatgactgcaataatatccgcaaaggggttatctggtcaaatacccagggatac
tgtaatccaaaagtcaatgaacttatggaggcagcagcacaggaaatgaattttgaaaaa
cgcaaagcattgtatgcagaatttcaaaaaatcgttgtccatgatctgcccatccttttt
ttaacaaaggttccgtatgttaccctgcataataaaaacctggcaggattaaatgacagc
atatggggactgctttcaccccttgaccaggtttactggaaagaaaaaccctga
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