KEGG   Desulfonema limicola: dnl_25880
Entry
dnl_25880         CDS       T07101                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
dli  Desulfonema limicola
Pathway
dli03030  DNA replication
dli03410  Base excision repair
dli03420  Nucleotide excision repair
dli03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dli00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    dnl_25880 (polA)
   03410 Base excision repair
    dnl_25880 (polA)
   03420 Nucleotide excision repair
    dnl_25880 (polA)
   03440 Homologous recombination
    dnl_25880 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dli03032]
    dnl_25880 (polA)
   03400 DNA repair and recombination proteins [BR:dli03400]
    dnl_25880 (polA)
Enzymes [BR:dli01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     dnl_25880 (polA)
DNA replication proteins [BR:dli03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     dnl_25880 (polA)
DNA repair and recombination proteins [BR:dli03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     dnl_25880 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     dnl_25880 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1 HHH_5 HHH_2
Other DBs
NCBI-ProteinID: QTA80291
UniProt: A0A975GGG2
LinkDB
Position
2793667..2796348
AA seq 893 aa
MPEKILYLIDGSAYIYRAYHAIRGGLSNSKGIPTNAAFGYTKMLIKLMEEKKPEYMAVLF
DMKGPTFRHEIYEAYKANRPPMPDDLAVQIPYIKDITRGFNLPLLEIQGYEADDLIGTLA
KQGEKAGFSVVMVTGDKDFLQLVTENITIWDPMKDTVNNVSTIRENFGVEPEQMIDVMGF
SGDTSDNIPGIPGIGPKTALNLIKTFGTMDKVYEQIDNIKNKKQREKLLDHKDQAFLSRR
LVAIKTDAPASFEPERFKFKEPDSKILSPIFKELEFRQLQKDYQADSDRSNKDYQGIYDL
KTLAALVKNLEAAGIFALDTETTSPDPMKAGLVGLSFSLEPDKAFYIPCGHDYIGAPKQL
KTDEILTALKPLLENPGIKKVGQNIKYDWIVLQRNGVMLDGVIFDTMVASYLIDPTKRAH
SLDRIAADFLDYKTISFEDVAGKGKSMIGFNQVLVEKAVPYACEDADITFMVYRILKEKL
EQTGLTELMEKVELPLIPVLKDMEMTGICVDEQRLRSLSKSFEHQLEQVEKEIYSIAGQE
FNIKSSQQLGFILFEKLNLPVQKKTKKKTGYSTDVDVLTTLAQTHELPALILRHRTLAKL
KSTYTDALLDIIHPETGRVHTSYNQTVTATGRLSSSDPNLQNIPIRTEEGLEIRKAFIPR
KGWTLVSADYSQIELRLLAHYSNDEILIKAFIDGEDIHTRTAAEVFQVFPQMITSELRRQ
AKAINFGIIYGMGAFKLANELGISRKMAQTYINNYFNRYKGVKLFIDKTIENAEKTLKTS
TLLGRIRLLPEINSTNKNIKSAAERTAVNTHIQGTAADLIKLAMIYVDKEIKKRNLKSAM
LLSVHDELVFEVPDNEIETIKTLVKDIMENIWDDLRVPLLVNVDTGKNWAEAH
NT seq 2682 nt   +upstreamnt  +downstreamnt
atgcctgaaaaaatcttatatctaattgacggaagcgcctatatttaccgggcataccat
gccataaggggcgggctttccaattcaaaaggaatccccacaaatgctgcttttggctat
acaaagatgcttataaagcttatggaggaaaaaaagccggaatatatggcagtattgttt
gacatgaaaggccccacattcaggcatgagatttatgaagcatacaaggcaaaccggcct
cccatgcctgatgatcttgctgtccagattccctatattaaagatattaccagggggttt
aaccttcctctcctggaaatccagggatatgaagctgatgatctcataggaacccttgca
aaacagggtgagaaagccggattttcagttgtcatggtaacaggggacaaggattttctc
cagcttgtaacagaaaatatcaccatctgggatcccatgaaggatacggtgaacaatgtc
agcaccatacgcgaaaacttcggtgttgagcctgaacagatgattgatgttatgggcttt
tcaggggatacatcagataatatcccaggaatcccgggaataggccccaagactgcactt
aatcttataaaaacctttgggaccatggataaggtttatgagcagattgataatataaaa
aataagaaacaaagggaaaagctgcttgaccataaagatcaggcgtttttaagccgcaga
cttgttgccataaaaacagatgctcctgccagttttgaaccagaaagatttaaatttaaa
gaacctgattcaaagattttatccccgatttttaaggaacttgaattccgccagcttcaa
aaggattaccaggctgattcagaccgtagcaataaggattaccagggaatttatgattta
aaaacccttgcagcacttgttaaaaaccttgaagctgccgggatttttgcactggataca
gaaactacttcacctgacccaatgaaagcaggacttgtcgggctttccttttccctggag
cctgataaagccttttacatcccttgcggccatgattatatcggcgctccaaaacagctt
aaaactgatgaaattctcacggctttaaaacccctgcttgaaaaccctggaataaaaaaa
gtggggcagaatataaaatatgactggattgttcttcaaagaaacggggtaatgcttgac
ggggtaatctttgacacaatggttgcatcctatcttattgacccaacaaaacgcgctcac
agcctggacaggattgcagcagatttccttgattacaagaccatatcctttgaagatgtg
gcaggaaagggaaaaagcatgattgggtttaaccaggttcttgttgaaaaggctgttccc
tatgcgtgtgaagatgctgacataacctttatggtttacaggattttaaaggaaaaactg
gagcagacgggccttacagaacttatggaaaaggttgaacttcccctgattcctgtttta
aaggacatggaaatgacaggcatatgcgttgacgagcaaaggctccgctccctttccaaa
tcctttgagcatcagcttgagcaggttgaaaaagagatttattccattgcaggacaggaa
tttaatataaaatcatcccagcagcttggatttatcctttttgaaaaactgaatctgcct
gtgcagaaaaaaacaaaaaagaaaacaggctattccacagatgttgatgtattaacaaca
cttgctcaaacccatgaactgccagccctgattttaagacaccgcaccctggcaaaatta
aaatcaacatatacagatgccctgctggacataattcatcctgaaacaggccgtgttcac
acgtcttacaatcagactgtaacagccacaggacgactcagcagctctgatcccaatctc
cagaatatccccatacgcacagaagaaggattggagatcagaaaagcctttatcccgcgc
aaaggctggacccttgtttctgctgactattcccagattgagcttcgccttttggctcat
tactcaaacgatgaaatccttataaaagcgtttatagacggtgaagacatacacacaaga
accgctgctgaggttttccaggtttttccccagatgataacatcagaactgaggcggcag
gcaaaagcaattaatttcggaattatctacggcatgggcgcattcaagcttgccaatgaa
ctgggcataagcaggaaaatggcgcaaacctatattaataattattttaacaggtacaaa
ggtgttaagctttttattgacaagacaattgaaaatgctgaaaaaaccctgaaaacatca
acccttcttggacgcatcaggcttctgcctgagatcaacagcactaataaaaacataaaa
agcgcagcagagcgcactgctgtaaacacccatatccagggaactgctgctgatcttatt
aaacttgcaatgatttatgtggataaggaaataaaaaaaagaaaccttaaatccgccatg
cttctttcagttcatgatgaactggtttttgaggttcctgataatgaaattgaaacaata
aagacccttgttaaggatataatggaaaacatatgggatgatctcagggttccgctcctg
gttaatgttgacaccggcaaaaactgggctgaggcgcattag

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