Desulfonema limicola: dnl_27620
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Entry
dnl_27620 CDS
T07101
Name
(GenBank) AAA ATPase-like domain-containing protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
dli
Desulfonema limicola
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dli03400
]
dnl_27620
DNA repair and recombination proteins [BR:
dli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
dnl_27620
Archaeal homologous recombinant proteins
dnl_27620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_21
CENP-F_leu_zip
AAA_27
AAA_18
FlxA
ABC_tran
AAA_22
DUF5494
Motif
Other DBs
NCBI-ProteinID:
QTA80457
UniProt:
A0A975GGQ9
LinkDB
All DBs
Position
complement(2972894..2976478)
Genome browser
AA seq
1194 aa
AA seq
DB search
MRILKVRFKNINSLKGEWEINFDQSPLSDTGIFAITGPNGAGKTSILDALSLGLYGQTAR
NKNSDKYIITKNDSESCSEVTFSVNHSVFKSKWSLKNSKGKLLDPEMTLAVINGDEKVLE
NKVNAVRLKIADITGLDFKRFCRTVMLAQGESAAFLNALDNERAEILEKIIGTQIFSQYS
QDIIKKADKENEKLLALKQSIQNFSFEKPDNIEAHKENINRLESEYNKAEAKLFMLKDQD
EKLKYKKQIQKQYEDIQLEFAYIQDKKSQKNEKFKRLKKAQQSLPLESGINQLDIYEKNA
AQILEKKEKLNSVIPLQKKVLKDLEQEKIKNEQELETIQARQDEQIESLEKAIGFDRDIE
SARKEFRDRVDQLESLEKKQDDNLNLQSEIKQKIIDKQIAWTHLDKQIKANVSHENLDKD
IFVIKNQLEKISQAGKFKTEIQNNLDSALPNEKKALAAQEKAENKILKIKKKNENLYLKA
DKKKQALNNMLNGDVIEDIEKEYNNQKEKLVTCKKLVELGKQYHKQALIKEKEGNAITHA
LENAQTEYSQLLTEFEAEQAKRDELEYSIIISKYNPDRKLLKTNKPCPLCGSKEHPFISQ
GLPYDNNPGHALKIQEKKLKDINKRTKTLLSQINSLTQKKNQIHELGKQWKDLCQTIDCE
WAVDDIDSAVKNTKALKKEVKVLAKQLKAIRKISQKIIKIQINIDKNADKILNKQMIADQ
LKSNAVIQKNIVIKLKNDLEDINQKTGKQKQILNEYLEKYNTVIPSQGREGELSLNLETL
KNEYLNQKHQAETLTTELKELAKQAKRLPHDLAQFKKQADNLEVLVRESQEKQTKLEIQR
TEFYGSGDPVVEKQVFEDKINACSEKQAQIILQTGTAARELEENLENMKQAETEYQNICK
EIESLKNFLLSKAIASGFNNIDEIRENILPLENQQAIENEQKELELELTEIRNKLEEIKN
KREQTLNEQAIEKSPDEISLEIQDLKKELEELNQDLKLSQEIIKDYESKEREYRQRIKVI
EDQEKICAELNAEKEYINSGNEPEIKKRIQTLMFEQLIEKTNKHLEELSGRYYIRTSGEQ
GLGLEIEDINQNRIRRSPRSLSGGESFQVSMALALGLSDLASDNRKIESLFLDEGFGTLD
DETLYKVITTLKNIKDNNKTVGIISHVKKIEDEIPTRIRIEKQSGGTSSIKVMA
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgagaattttgaaagtgagatttaaaaatatcaattcattaaaaggggaatgggaaatc
aattttgatcaatctccactttcagataccggaatattcgctattacaggaccaaacggg
gcaggtaaaaccagtattcttgatgcattatctctgggcctttacgggcagacagccagg
aataaaaattctgacaaatatataattacaaaaaacgattctgaatcctgttctgaagtt
actttttctgtgaaccactcggtttttaaatcaaaatggtctttaaaaaactccaaagga
aaacttctggatcctgaaatgacactggcagttataaatggagatgaaaaagttcttgaa
aataaagttaatgctgttcgattaaaaattgctgatatcacaggtcttgattttaaacgc
ttttgcagaactgtaatgcttgctcaaggtgaatctgctgcatttttaaatgctcttgat
aatgaaagagctgaaattcttgaaaaaattataggtacccagattttttcccaatattca
caagatattattaaaaaagcagataaagaaaatgaaaaactcctggctttaaaacaaagt
attcaaaatttttcttttgaaaaaccagataatattgaagctcataaagaaaatattaac
cgtctggaatcagaatataacaaagctgaagcaaaattgtttatgctgaaagaccaggat
gaaaaacttaaatataaaaagcaaattcaaaaacaatatgaggatattcagcttgaattt
gcatatatacaggataaaaaatctcaaaaaaatgaaaaattcaaacgtcttaaaaaagcc
cagcagtcccttccccttgaatcaggaataaaccagcttgatatttatgaaaaaaatgca
gctcaaatacttgaaaaaaaagaaaaactcaattctgtgattcctttgcagaaaaaagta
ttaaaagatctggaacaggaaaagataaaaaatgaacaggaacttgaaacaatacaggcc
agacaggatgaacagatagaatctcttgaaaaagcaatagggtttgaccgtgatattgaa
tccgcaagaaaagaatttcgagacagggttgatcagctggaatctttggaaaaaaaacag
gatgataacctgaatcttcaatcagaaataaaacaaaaaatcatagataagcagattgcc
tggacccatttggataaacaaattaaggcaaatgtatcccatgaaaacctggataaagat
atttttgttataaaaaatcaacttgaaaaaataagccaggcaggaaaattcaagacagaa
atacaaaataatcttgactcagcattgccaaacgaaaaaaaagctcttgctgcacaggaa
aaagcagaaaataaaatcttgaaaataaagaaaaaaaatgaaaatttatatttaaaggct
gataaaaaaaaacaagctttaaacaatatgcttaatggagatgtgatagaagatattgaa
aaagagtataacaatcaaaaagaaaaactagtaacctgtaaaaagcttgttgaactggga
aaacaatatcataaacaagctttaataaaagaaaaggaaggaaacgcaattacacatgct
cttgaaaatgcacaaacagaatattctcaattattaactgaatttgaggctgaacaggca
aaaagagatgagcttgaatattccataattatctcaaaatacaatcctgatcggaaattg
ttaaaaacaaacaagccatgccctctttgcggttcaaaagaacatccatttatatctcaa
ggactgccatatgataataatccgggtcatgcccttaaaatccaggaaaaaaagttaaaa
gatattaataaaagaacaaaaactcttttatcacaaattaacagcctgacccagaaaaag
aatcaaatccatgaactgggtaaacaatggaaagatttatgccagactattgactgtgaa
tgggctgttgatgatattgattctgctgtaaaaaacaccaaagccttaaaaaaagaagta
aaagttcttgcaaagcagttaaaagccataagaaaaatcagtcaaaaaataatcaaaata
cagataaacatagataaaaatgcagataagattttaaacaaacagatgatagctgatcag
ttgaaaagcaatgctgttattcaaaaaaatattgttattaaattaaaaaatgatctggaa
gacataaatcaaaaaacagggaagcaaaaacaaattcttaatgaatatttagaaaaatac
aacacagtcattccaagccagggaagggaaggggaattgagtttaaatctggagactctt
aaaaatgaatacctcaatcaaaaacaccaggcagaaactttaacaactgaactaaaggaa
ttagcaaaacaggcaaaaagacttccccatgacctggctcaatttaaaaaacaggctgat
aatctggaagttctggtcagggaaagccaggaaaaacagacaaaactggaaatccagcga
acagagttctatggttctggtgatccggttgtagaaaaacaggtttttgaagataagatc
aatgcctgttctgaaaaacaggctcaaattattctgcaaacaggaactgctgcccgggaa
cttgaagaaaatctggaaaatatgaaacaggcagaaacagaatatcaaaatatctgcaag
gaaattgaatctttaaaaaattttctgttaagcaaagccattgcatcaggatttaataat
attgatgaaataagagaaaatattttacccctggaaaatcagcaggctattgaaaatgaa
caaaaggaacttgaactggagttaactgaaatcaggaacaaactagaagaaataaagaat
aaacgtgaacaaaccctgaatgaacaggctattgaaaaatcacctgatgaaatcagcctg
gaaattcaggatctaaaaaaagaactggaagaattgaaccaggatcttaaattatcccag
gaaatcataaaagattatgaatcaaaagaaagagaatacaggcagagaataaaggtaata
gaagatcaggaaaaaatatgtgcagaattaaatgctgaaaaagaatatattaactcaggc
aatgaacctgaaataaaaaaacggattcaaactcttatgtttgaacagctgattgaaaag
accaacaaacatcttgaggaattgagcggacgttattatatcagaaccagcggtgaacag
ggattagggcttgaaattgaagacataaatcaaaacaggatacgcagatcacccagaagt
ttatcaggaggtgagagctttcaggtcagtatggccctggctcttggactttctgatctt
gcttctgataacaggaagatagaatccttgtttttagatgaaggttttggcactttggat
gatgaaaccctgtataaagtaattaccaccttgaaaaacataaaagataacaataaaaca
gttggaattatctcccatgtaaagaaaattgaagatgaaataccaaccaggataagaatt
gaaaaacaatctgggggaaccagttctattaaagtcatggcataa
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