Desulfonema limicola: dnl_29050
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Entry
dnl_29050 CDS
T07101
Symbol
lktB
Name
(GenBank) Leukotoxin translocation ATP-binding protein
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
dli
Desulfonema limicola
Pathway
dli02010
ABC transporters
dli03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
dnl_29050 (lktB)
03070 Bacterial secretion system
dnl_29050 (lktB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dli02000
]
dnl_29050 (lktB)
02044 Secretion system [BR:
dli02044
]
dnl_29050 (lktB)
Transporters [BR:
dli02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
dnl_29050 (lktB)
Secretion system [BR:
dli02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
dnl_29050 (lktB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
cNMP_binding
ABC_tran
SMC_N
AAA_22
Peptidase_C39_2
AAA_29
AAA_24
Guanylate_cyc_2
AAA_14
NACHT
AAA_18
NB-ARC
AAA_33
Motif
Other DBs
NCBI-ProteinID:
QTA80596
UniProt:
A0A975B805
LinkDB
All DBs
Position
3133926..3136967
Genome browser
AA seq
1013 aa
AA seq
DB search
MSGLLQFISETYAFSGFSPEDIEYITAGCQVKSYDLGDDIIKAGEFSPGLWLVRSGKVRM
FTQKGKKEISTGICGIGDTFEEISIFKEHESEYSVRSSGKSQVLCFPREIFKSILENNSQ
AQNFIRQYIAEKSCQSFIVPLFKLNSGFNPQEIKEIVKNTGIRRVSKGESIIIQGDTENR
DLYIVRKGKIRIIFKNDAQQHILADYEKGDIFGEKACITNMSQPAHAVADCDSVLLVIPR
KTIGTILKQIPDLRSFFEKRTDFIEKEINRHLSLAGQNKNMFLFSGGAAAGRGEKFIRHF
PLSEQAEEADCGAACLSMICRYHDINISTGKLNEMTKVTVQGATMESLVRTGESLGFTAK
GVKCTYKILESFDLPLIVHWKGYHFIVIYGISSSHVWTADPGAGFKKMSRSEFENGWTDY
CITFTPPDQMSMAQKQQSSWIRFASYLLPLKKYLMDIFFAVFIIQVLGLVPPVIIQNILD
RVVVHQSYDLLNIMIAGLGIATIFRLITGYVSAYLMNFMIRKLDFNMISHFYKHILSLPV
SFFTMRKVGDIIARFHENNTIRRFMTEGSISTVLNTLMLFTYFTVMFIYNAELTLILIAF
LPPIIILTLLAAPKYKDYARKIFYARADTESILVETLGGAEVVKGMGIEHSMRMKWEKKY
AKTLSLRYRAELFAVLITSVSSALQAGTQLTLLWVGTRMVLNQELTIGQLMAFNVLIGSV
MSPVMGLVGIWNELQECLVSIERLGDILEVEPEQKPEEIQSRIILPELAGSFRFEKVFFR
YGGKESSYILRNINLNIEPGQTIAVVGPSGSGKTTLAKLMTGFYKCSEGKIYVDDYDINL
LDMESYRKHIGYVMQENSLFSGTISENIAIGDLNPDFQKITHAAKLADADGFIKNLPMQY
GQVAGERGMGLSGGQIQRICIARALYHNPGLLIFDEATSSLDSESETQIHHNLQNIFKNR
TAVIIAHRLSTVKNADKIIVLYEGSIEEQGNHEELINKKGMYYQLVKKQNIGD
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
ttgagcggacttcttcaatttatatccgaaacatatgctttttcaggtttcagccctgaa
gatattgaatacataactgccggatgccaggttaaaagttatgacttgggagatgatata
ataaaagcaggcgaattttctccaggactctggcttgtccgttcaggcaaagtcaggatg
tttactcaaaaaggaaaaaaagagataagcacaggcatttgcgggattggagacaccttt
gaagaaatctcaatctttaaagaacatgaatctgaatactcagttcgttcatcagggaaa
agccaggttttatgctttccccgtgaaatcttcaagagtatcctggaaaataattcacaa
gcacagaattttataagacagtatattgctgaaaaatcatgccaaagctttattgtgcct
ttatttaagctcaattcaggatttaacccccaggaaattaaagaaattgttaaaaataca
ggcattcgcagggtatcaaaaggagaatccattataattcagggggatacggaaaacagg
gatttatatattgtaagaaaagggaaaatacggattatctttaaaaatgatgctcaacag
catatcctggctgattatgaaaaaggagatatttttggagaaaaagcctgtataaccaat
atgtctcagcctgcacatgctgttgcagactgcgattcggttttgcttgttattccaaga
aaaacaatagggactatcctgaaacaaattcctgatttaaggtctttttttgaaaaacgc
actgattttattgaaaaggagattaatcgccatttatcccttgcaggacaaaataaaaac
atgtttttattttcaggaggggcagcagcaggcaggggagaaaaatttatcaggcatttt
cccctttcagaacaggcagaagaagctgactgcggggcagcctgtctttccatgatatgc
aggtatcatgatataaatatttcaacaggcaaacttaatgaaatgacaaaggttacagta
cagggcgcaactatggaaagccttgtacgcacaggcgaatctctgggttttacggcaaaa
ggagtaaaatgcacctataaaatacttgaaagctttgaccttccgcttattgtgcattgg
aaaggataccattttattgttatatacggcatttcaagctcccatgtatggacagcagat
ccaggagctggatttaaaaaaatgtcccgttctgaatttgaaaacgggtggacagattac
tgcataacctttaccccgccagatcagatgtctatggctcaaaagcaacagtcctcctgg
attcgttttgcaagctatctgctgcctttaaaaaaatatctgatggatatattttttgct
gttttcattatccaggtgcttgggctggtacctcctgttattatccagaatattcttgac
agagttgtagttcatcagagctatgatcttttaaatatcatgattgcaggtcttggaatt
gcaacgatatttagattgattacaggctatgtcagtgcctatctcatgaatttcatgatc
cgcaaacttgattttaacatgatttctcatttttataagcatatactctcccttcctgtt
tcattttttacaatgcgcaaagtcggcgatattattgcccgttttcatgaaaacaataca
atcaggcgttttatgacagaaggcagtataagcactgtattaaataccttaatgctgttt
acctattttacggtaatgtttatttataatgctgaattgacacttattcttattgcattc
ctgcctcctattataatccttaccctgcttgcagcaccaaaatacaaggattatgcacga
aagatattttatgcacgggctgatactgaatccattttagttgaaaccttgggaggtgcc
gaagttgttaaaggcatgggaattgagcattccatgcgcatgaaatgggagaaaaaatat
gcaaaaaccctcagccttcgttacagagcagaactttttgctgttttaataacctctgtc
agcagcgctttacaggcaggaacccagcttactcttttatgggtggggacaaggatggta
cttaaccaggaacttaccataggccagttaatggcttttaatgttctgattggaagcgtt
atgtccccggtcatgggcctggtgggaatctggaatgagcttcaggaatgcctggtatca
atagaacgtcttggagatattttggaggtagagccagaacagaagcccgaagaaatccag
tcccgtattattcttcctgaacttgcaggaagttttagatttgaaaaggtttttttcaga
tacgggggcaaagaaagctcatatattctcagaaatataaatcttaatatagaaccagga
caaacaatagctgttgtaggtccaagcggttcaggaaaaacaaccctggcaaagcttatg
acaggtttttataaatgcagtgaaggtaaaatttatgttgatgattatgatattaatctt
ctggatatggagtcttacaggaaacacatcgggtatgttatgcaggaaaattcacttttt
tcaggaactatttctgaaaatattgcaatcggagacttaaaccctgattttcagaaaata
acccatgctgcaaaactggcagatgccgacgggtttataaaaaatctgcccatgcagtac
gggcaggttgctggagagcgcggcatggggctttcaggaggacagattcagcgaatctgt
attgcaagagcgctttatcacaatccaggtcttttaatctttgacgaggcaacatcttcc
cttgacagcgaatctgaaacacagattcatcataatcttcagaacattttcaaaaatcgt
actgctgttattatagcccatcgtttaagtactgtaaaaaatgcagataagataattgtt
ttatatgaaggcagtattgaagaacagggaaatcatgaagaattgattaataaaaaagga
atgtattatcagcttgttaaaaaacagaacattggagattaa
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