KEGG   Desulfonema limicola: dnl_30710
Entry
dnl_30710         CDS       T07101                                 
Name
(GenBank) Putative CRISPR-associated helicase Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
dli  Desulfonema limicola
Brite
KEGG Orthology (KO) [BR:dli00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dli02048]
    dnl_30710
Enzymes [BR:dli01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     dnl_30710
Prokaryotic defense system [BR:dli02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    dnl_30710
SSDB
Motif
Pfam: Cas3-like_C_2 Helicase_C DEAD ResIII Cas3_HD AAA_22
Other DBs
NCBI-ProteinID: QTA80758
UniProt: A0A975GH07
LinkDB
Position
complement(3272751..3275111)
AA seq 786 aa
MSVNMLRSHSSPDLFLHEHINQVFTAMQGIFSWHSESLITSEIREICQKLSCCHDLGKGS
SAFQEYIADPERFLEENDPLDKSHTPLSFFLTISKAEQEKRDSLETLLLCACIYGHHGGL
PLLPPRCGQSGKQKTLDQFAAGRMYKILCTQIENTDYAALEKETDVPLTGLSSDKKMFLK
ISRFLKNHLFSSLRKLSVDDAVIFRLKTQLSFSILLEADKAFLAVKNSDLYLKRDPRFWQ
SQWIDLFIGNPEDTEVNRLRQKAKKAVQESIANNRQDFIQSLTAPTGLGKTLLAADWALR
NRELSIAEVHYPPKIIVVMPFLSIIDQTSGVYKKLLEFGTDKPDGSWFLTSHSLSDREYS
PEMEDNEAGFFIDTWRTELIITTYDQFLMSLVDPKARYQMRFHNLCDSLIIMDEVQSLPC
HMWQLLNTVFKYLADTCNTKILLMSATLPPFVKDARPLLENYKDYFIFRRYKFIFKHGGS
QNINDFCEKIGKRLINWLEIGERVLITLNTRKSAGMVFDYLQKLWPEEYQDIKAFFISAD
VTPKDRLKKIEEIKKGRPCIVVSTQCIEAGVDIDMSLIIRDFAPWDSLVQIAGRCNREGE
RGEFLTVEIADLSDDKGKRYSEMIYDIIHLNVTRHIIGDRDTISEHETLAFSEEYFDRLN
SAKDTGKKHLERFAYWEEDVSIHELLRGDKMQHTFLVIEQDRELLNKMKQIKDIEDRWKR
RDAWRKLAGRIASISVSIFARYGFKPEEIASNQMGQWILHDGYYDSESGLKIDSIYADKN
NVSIIF
NT seq 2361 nt   +upstreamnt  +downstreamnt
atgtctgtaaacatgcttcgatcacacagcagccctgatctttttcttcatgagcatatt
aatcaggtttttactgccatgcagggcattttttcctggcattcggaatctcttattaca
tctgaaatcagagagatttgtcaaaagctgtcctgctgccatgatttgggtaaaggaagt
tctgcatttcaggaatatattgctgatcctgaaaggtttcttgaagaaaatgatcctctt
gataaaagccatacgcctttgtcattttttctgacaatttcaaaagcagagcaggaaaaa
cgggatagcctggaaacacttctgttatgcgcctgtatatacgggcatcacggtggttta
cctttgctgccccctcgctgcggccaatctggaaaacaaaaaactcttgatcaatttgca
gcaggcagaatgtataaaatcctgtgtacccagatagaaaatacagattatgcagctttg
gaaaaagaaacagatgtgcccctgacaggtctctcatctgataaaaaaatgttcctgaaa
ataagccggtttttaaaaaatcatttattttcatccttgagaaaactgtctgttgatgat
gcggttatttttcgtttgaaaacacaactttcattttccatactcctggaagcagacaag
gcttttttagctgttaaaaattcagatttatatctcaaaagagacccaagattctggcag
tctcaatggatagacctttttatcggcaatccagaagataccgaggtaaaccgtttaagg
caaaaggcaaaaaaggctgttcaggagagtattgcaaataaccgtcaggattttattcaa
agtctgactgcaccgacaggcctgggaaaaaccctgctggcagcagactgggcgctgaga
aatcgtgagctatcaatagcagaagttcactatcctcctaaaattattgttgtaatgcct
tttttatccatcatagatcaaacttcaggtgtttacaaaaaactgcttgaattcggaaca
gataaacctgacggttcatggtttttgacaagtcattctctttctgaccgggagtacagc
cctgaaatggaagataatgaggctggtttttttattgatacctggcgcacggagttaata
attaccacatatgatcagtttttaatgagtcttgttgatcccaaagcccgttatcaaatg
cggtttcataatttgtgcgattctttgattatcatggatgaggttcagtcgctcccatgt
catatgtggcagcttctgaacactgtttttaaatatcttgcagatacctgtaatacaaag
atacttttaatgtcagctacacttccgccatttgtaaaagatgctcgtccccttcttgaa
aactacaaagattattttatcttccgccgctataaattcatttttaaacacggcggttcc
cagaatatcaatgatttttgtgaaaaaataggaaaacgtttaatcaactggctggaaatc
ggggaacgggttttaataaccctgaatacacgtaaaagtgcaggcatggtgtttgattat
ttacaaaaactctggcctgaagaatatcaggatattaaggcattttttataagcgcagat
gttactccaaaagacaggcttaaaaagattgaagaaattaaaaaaggccgtccgtgtatt
gtagtttcaacccagtgcatagaagctggtgtggatattgatatgagccttataatcaga
gattttgctccctgggacagccttgttcagattgcaggaagatgcaaccgggaaggtgaa
agaggtgaatttcttacagttgaaattgcagatctgtcagatgataaaggtaaacggtat
tcggaaatgatatatgatataatccatctgaacgtaacacggcatattatcggagacagg
gacactatatcagagcatgagacccttgcattttctgaagaatattttgatagattaaac
agtgcaaaagataccggtaaaaaacatcttgaacgttttgcctattgggaggaagatgtt
tctattcatgaacttctgaggggcgacaagatgcagcatacattcctggttattgagcag
gatcgtgagttattaaacaaaatgaaacagatcaaagatattgaagaccgctggaaacgc
agggatgcatggcgtaaactggctggcagaattgcatccatttcagtaagtatttttgcc
agatatggttttaagcctgaagaaattgcaagtaatcaaatggggcagtggatactgcat
gacggatattatgattcagaatcaggcttgaaaattgacagcatatatgctgataaaaat
aatgtgagcataattttttaa

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