Desulfonema limicola: dnl_31590
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Entry
dnl_31590 CDS
T07101
Name
(GenBank) Transcriptional regulator, sigma54-dependent
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
dli
Desulfonema limicola
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dli03000
]
dnl_31590
Transcription factors [BR:
dli03000
]
Prokaryotic type
Helix-turn-helix
Other families
dnl_31590
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
AAA_5
AAA
GAF_2
HTH_8
Mg_chelatase
AAA_2
AAA_16
GAF_3
GAF
AAA_7
AAA_3
Motif
Other DBs
NCBI-ProteinID:
QTA80846
UniProt:
A0A975GGX9
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Position
3364992..3366590
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AA seq
532 aa
AA seq
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MTAGMIIDEKDFFREATIRICGSLEIEKALHQCLVYISEFIPADQMSFHVYHQEQGVVET
VAHADLNSGKAMSVRTPLPPEGRRQVEEQRSVRIRIIDRLGDDPVTGPVAAKMKASDLSA
VVMDLVLEKTMLGVFSIFSHPGERFNKNHIRFLSLLNRPCAIALTNSLRYRELRKLRDLL
ADDNRYFQDELRRLSGEDLIGSEFGLKGVMEMVRQVAPLDSPVLLLGETGTGKEVIANAI
HNSSRRKQGPFIKVNCGAIPETLMDSELFGYEKGAFTGALSQKRGRIERADGGTLFLDEI
GELPGEAQVRLLRVLQEKEIDRLGGTRSVNVDIRIIAATHRNLESMIDKGEFRADLYFRL
RVFPILIPPLRERKTDIPALVRHFILKKSHEMKRLIIPDLAPGAIDRLMAYHWPGNIREL
ENATERSLILNPGNTLFFKEIGSRISSTNKQDRFKDNTKTGESLELDAVVCRHIKKIMNM
CGNRVEGEHGAAKILNINPSTLRKRMKKLGIPFGRKAANRFGSSSKGDDSCR
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaggtatgattattgatgaaaaagattttttcagggaagcaacaataagaatc
tgcggaagcctggaaattgaaaaagctcttcaccaatgccttgtttatataagcgaattt
attccagcagaccagatgagctttcatgtttatcatcaggagcagggggttgttgaaact
gttgcccatgctgacttgaactccggtaaagccatgtcagtcagaacccctctgcctcct
gaaggacgcaggcaggttgaagaacagcgctcggtacgcatcaggattattgaccgactt
ggagatgaccctgttacagggcctgttgctgcaaaaatgaaagcatcagacctttcagca
gtggttatggatcttgtgctggaaaaaaccatgctcggggttttttccatattcagccat
ccaggagaaagatttaataaaaatcatatcagatttttaagccttttaaacaggccctgt
gccattgcattgaccaacagcctgagataccgtgaactcagaaagctcagggacctgctt
gctgatgacaatcgttattttcaggatgaactgcgccgtttaagcggcgaagaccttatc
ggttctgaatttggtcttaaaggggtaatggaaatggtgcgccaggttgcacccctggac
agccctgttcttcttctgggagaaaccggaaccggcaaagaggttattgccaatgccatt
cataattcatcaaggcggaaacagggcccttttatcaaggtcaattgcggggcaatacct
gaaacccttatggacagtgaattattcggatatgaaaaaggagcttttacaggtgcgctt
tctcaaaaaaggggacggattgaacgtgctgacggaggaaccctttttctggatgaaatc
ggtgaacttcctggtgaagcccaggtcagacttttaagggttctccaggaaaaagagatt
gacaggctgggaggaacaaggtctgttaatgttgatataagaatcatagccgcaacccac
agaaatctggaatcaatgatagataaaggggaatttcgtgctgacctttattttcgtctc
agggtttttcccatactcatcccccctttaagagagcgaaaaacagatatacccgccctt
gtacgccattttatcctgaaaaaatcccatgaaatgaaaaggcttataatacctgacctg
gctcccggagccatagaccggcttatggcttaccactggcccggcaatattcgagaactt
gaaaatgcaactgaaaggtcccttattcttaatcctggaaatacactttttttcaaggaa
atcggttcaagaataagcagtacaaataaacaggatagatttaaagataatacaaaaaca
ggagaatcccttgaacttgacgctgttgtctgccggcacataaaaaagataatgaatatg
tgcggcaacagggtcgagggtgaacatggagcagccaagatattaaatattaatccgtca
accctgagaaagcgaatgaaaaaacttggaattccttttggcagaaaggctgcaaacagg
tttggctcttcctcaaaaggtgatgattcatgcagataa
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