Desulfonema limicola: dnl_34430
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Entry
dnl_34430 CDS
T07101
Name
(GenBank) Extracellular solute-binding protein, family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
dli
Desulfonema limicola
Pathway
dli02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
dnl_34430
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dli02000
]
dnl_34430
Transporters [BR:
dli02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
dnl_34430
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QTA81116
UniProt:
A0A975GH73
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All DBs
Position
complement(3644400..3646178)
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AA seq
592 aa
AA seq
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MRNKYLTMLFGRFKPNRKGILYMFRIIIIMLIIFAEIQAAGSEKAVLYEPAVLRHDDAFS
RTASPLAQGSHLKVFIPSLPYIYISHAINGALFRPANNQKGWQFDMAEDYRQINDMVYEF
KLRKGVRFQDGTPFNADMVILNMEYFIQAPFLWSKTHLVFDGAEKIDDYSVRFYLKEKYG
QFINDLIWLQFYTPAYLEKFGWNGKSTCPNLAEPGNYGLGPYILEQGYIEGNRQTKKAVL
KANPDYWNKDYPKIQTITIYTELDTEEALKKILYQEGELDIMPIPFSRKVETILSPYAKV
ITAPSTNNWAVHFNLRNGNKRLLEKSVRIALNQAIDQENLLNFVYDTEGIAKPTLASPLF
PGVKNAVKTIRPRSELGNPGLPEEQEQLRTVLNGLCLKVLTQERFMFLWKGIEYQLGRAG
VSLEFEITKSEKDIFAQLLTTNAGKNTKNWDMLIWANDDWYYNHPWSAFLVYRTHDSWST
IFPDPVLDNYIDRMFITRTGTPEFETSVETIIKHVHDNAYMLYVPAPNQVMAVNKEVVFN
PYKMACMPLWEIELTKDHYSVRQGNYPEKLKNPVQIVRFKADQNSVIVKHNN
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgagaaataaatatttaaccatgctttttggcagattcaaaccaaacaggaaaggaata
ctttatatgtttagaattattatcatcatgctgataatttttgctgaaatccaggctgcc
ggatcagaaaaagctgtgttgtacgaacctgctgtattaagacatgatgatgcattttca
cgcacagcaagcccgctggcacaagggtctcatctaaaagtatttattccctcccttccc
tatatttatatctcccatgcaataaacggagccttattcaggcctgccaataatcaaaaa
ggctggcagtttgatatggctgaagattacaggcagatcaatgatatggtttatgaattc
aagctgcggaaaggagtgagatttcaggatgggaccccttttaatgcagatatggttata
ttgaatatggaatattttatacaagctccttttttatggtcaaaaacccatctggtgttt
gatggtgcggaaaagattgatgattacagcgtcaggttttacctgaaagaaaaatacggt
caatttatcaatgatttgatctggcttcagttttacacccctgcatatctggaaaaattt
ggatggaatggtaaatccacctgccccaacctggctgaaccaggtaattacggcctgggt
ccttatattcttgaacaaggatatattgaaggaaaccggcagacaaaaaaagcagtttta
aaagccaatcctgactactggaacaaggattatccaaaaatacaaaccataactatatat
acagaactggatacagaagaagctctaaaaaagatattatatcaagaaggcgaactggac
attatgcccattccattttcaagaaaagtggaaaccatcctctccccttatgcaaaagtt
attacagcaccttcaacaaataactgggctgttcattttaacctacgtaacggcaataaa
agacttctggaaaaatctgtccgcattgccttgaaccaggccattgatcaggaaaatctc
ctgaactttgtttatgacaccgaaggaattgcaaagccaaccctggcttcccctttattt
ccaggtgtaaaaaatgcagtaaaaaccatccgtcccagatctgagctgggtaatccaggt
ctgccggaagaacaggaacaacttagaacagttttaaatggcctctgtctcaaggtctta
acccaggaaagattcatgtttctctggaaaggaatagaataccagttaggcagggcaggg
gtaagtcttgagtttgaaataacaaaaagtgaaaaagatatttttgcccagctccttact
accaatgccggaaaaaacacaaaaaactgggacatgctcatatgggcaaatgatgactgg
tattataaccatccctggtcagcttttcttgtttaccgtacccatgattcctggagtact
atttttcctgaccctgtacttgataattatattgaccgcatgtttataacaagaacaggt
acgcctgaatttgaaaccagtgtagaaaccataataaaacatgtacatgacaacgcatat
atgctttatgttccagcccccaatcaagtcatggcagttaataaagaggttgttttcaat
ccctataaaatggcctgtatgcctctttgggagattgaactgacaaaagatcattattct
gtaaggcagggaaattatcctgaaaaacttaaaaatccggttcagattgtacgctttaaa
gcagatcaaaacagcgtaattgtaaaacacaataattaa
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