Desulfonema limicola: dnl_34620
Help
Entry
dnl_34620 CDS
T07101
Name
(GenBank) Sigma-54 interaction domain-containing protein
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
dli
Desulfonema limicola
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dli03000
]
dnl_34620
Transcription factors [BR:
dli03000
]
Prokaryotic type
Helix-turn-helix
Other families
dnl_34620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
HTH_30
AAA
GAF_2
nSTAND3
AAA_5
AAA_2
AAA_14
Parvo_NS1
RhgB_N
Motif
Other DBs
NCBI-ProteinID:
QTA81133
UniProt:
A0A975GHW1
LinkDB
All DBs
Position
complement(3669982..3671550)
Genome browser
AA seq
522 aa
AA seq
DB search
MKTDTDFFFRKATLLICSSLDIEVSLWRCREFISKYIPADEIYLNIYEPSIGGLRYIARA
DEAGCEKMEKNIKLPSDLIKSIESGQRLQDYLIINKPENDPMGRIISSEMNLKNTSFIAL
RLRIEGHRLGVIDLFAQGKDRFTSEHAKLFSLLKEPFAIAMSNALKHQEVVQLKEQLISD
NRYLHNELISKSGDEVIGAGSGLKGVMEKVGQIAHLKNTILILGETGAGKEVIANAIHCY
SLRKNQPFIKVNCGAIPENLIDSELFGHEKGAFTGAVSQKRGLFERASKGTIFLDEIGEL
PSWAQIRLLRVLQTQEIERVGGSPPIKLDIRVIAATHRDLNKMVLQGDFREDLWFRINAF
PIHIPALRMRPNDIPMLVEHFIKKKSKELGIHKIPAIAPEALDRLLKHHWPGNVRELENA
VERALIQHRSGPLFFNQLMDYEDNGGSAIPLKHKLSSMNLDEIIKACIEQVLSMTNGRIN
GPKGAAKILGVHPNTLRHRMKKLGINFGKVSLLAILIRHALS
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagacacggatttttttttcagaaaagctactctgcttatttgcagcagtctt
gatattgaggtttctctctggcgctgccgggaatttatctcaaaatacatacctgctgat
gaaatatatttaaatatttacgaaccttctattggcggattgagatatattgcccgtgct
gatgaggcagggtgtgaaaaaatggaaaaaaatattaaacttcccagtgatcttataaaa
tcaatagaaagcgggcagaggcttcaggattatctgattatcaacaaacctgaaaacgat
cctatgggcaggatcatctcatctgaaatgaacctgaaaaatacatcgtttattgcatta
agacttagaattgaagggcacaggcttggggtgattgatctttttgcacaaggaaaagac
agatttacttcagaacatgcaaaacttttctcgcttttaaaagagccttttgccattgcc
atgtcaaatgctcttaaacatcaagaggttgtacaattaaaagagcagcttatatctgat
aaccgttatctgcacaatgagctgatttccaaatcaggggatgaggttattggagcaggt
tcaggcctcaaaggggtaatggaaaaagtgggacagatagcccatctgaaaaacacaatc
cttatcctcggagaaacaggggccggcaaagaggttatagcaaatgccatacattgttat
tcccttcgcaaaaatcagccttttataaaagtaaattgcggagccatacctgaaaacctt
attgacagtgagctttttggtcatgaaaaaggggcatttacaggtgctgtcagtcaaaaa
cgcgggctttttgaacgagccagcaagggaaccatttttttagatgaaatcggggaactt
ccttcatgggcgcaaatcaggcttctcagggtactccagacccaggaaatagagcgtgtc
ggcggctctcctcccattaaactggatataagggttatagctgcaacccacagagattta
aataaaatggttcttcagggcgattttcgtgaagatctttggtttcgcataaatgctttt
cccattcatatccctgctttgagaatgcggccaaacgatattcccatgctggttgaacat
tttataaagaaaaaatcaaaagaactgggaatacacaaaattcctgcaattgctccagaa
gctttggatcgtcttttaaaacatcactggcccggcaatgtaagggagcttgaaaatgca
gtggaaagggcattgattcaacatcgcagcggcccccttttttttaatcagcttatggat
tatgaagacaacgggggatctgcaatccctctaaaacacaaactcagctccatgaatctt
gatgagattataaaagcctgcatagaacaggttttgagtatgacaaacggcaggattaac
ggccccaaaggagctgcaaagattctaggagttcatccaaatactttaagacacaggatg
aaaaaactaggtataaactttggaaaggtcagcctgttagcgatactaatccgacacgca
ctctcctga
DBGET
integrated database retrieval system
