Desulfonema limicola: dnl_35140
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Entry
dnl_35140 CDS
T07101
Symbol
pbpC
Name
(GenBank) Penicillin-binding protein
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
dli
Desulfonema limicola
Pathway
dli00550
Peptidoglycan biosynthesis
dli01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
dnl_35140 (pbpC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
dli01003
]
dnl_35140 (pbpC)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dli01011
]
dnl_35140 (pbpC)
Enzymes [BR:
dli01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
dnl_35140 (pbpC)
Glycosyltransferases [BR:
dli01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
dnl_35140 (pbpC)
Peptidoglycan biosynthesis and degradation proteins [BR:
dli01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
dnl_35140 (pbpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
BiPBP_C
Motif
Other DBs
NCBI-ProteinID:
QTA81183
UniProt:
A0A975B971
LinkDB
All DBs
Position
complement(3728264..3730651)
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AA seq
795 aa
AA seq
DB search
MYPADSKYFHPAVFTGFLIFLSLVLYTGTAFIVLDKQFPFYQPEYDKNFAVTVVSDNGTP
LRSFPDTKGVWRYPVNIKEVSPLYIQALINYEDRYFRFHPGVNPLALVRALFQFLDSGRF
LSGGSTLTMQAARILHPHTKDIKGKSCQMFRAFQLEYHFTKDEILNIYLNYAPFGGPIEG
VQAASFAYLGKSALELSHAEAALLAVLPQSPSRMRPDRHPDRASRGRNKVLDRMAKFGIW
DKSIVKDAKMEKVLARFEPKPMTAPLLARRLKSQGNPFQPVRTFIDPFIQETVADLIYGF
TADTPEHTSGAAIVVENKSLKVRAYVGSADFFNNSRFGHVDMVGAIRSPGSTLKPFLYAI
AMEEGLIHSESLLVDAPFSFSGYRPDNFTRHFSGPVSASEALCRSLNLPAVDIIDRIGPK
FFDTRLRQGGLKLQYPNYQEPNLTMILGGAGTSLEDLVSAYTAFARGGMAGELRFTQNQK
IKQKPMLTKGAAYIIRQILEENPRPDLPAGRLFLDRSRQAAWKTGTSYGFRDAWTIGITD
QYTIGVWTGRPDGTPSPGQYGRAAAAPLFFSIVDSLPRQYTSPSSIPDTVSRREICWPLG
IPASEKYKTGKDPLCHRRRMAWILNNIIPPAFPDRTDELWQPNPVSIMINPETGLRVDID
CPVFNPVKTLIARWPRASEPWLSPELRRKSSIPPFDPRCSSSSFNYADNIKIMGIEDNTI
FRPPGSETRLPSVNLMARGGKKNLYWLLNGRLIARSGINETCIYQFKSPGQYQLTVMDQA
GNYDFVQFTVISPEI
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
ttgtatccggctgacagtaaatattttcacccagctgtttttactggtttcctgattttt
ctatccctggttctatatactggaactgcatttatagtgcttgataaacaattccctttt
tatcagcctgaatatgataaaaattttgctgttactgttgtttctgacaatggaactcct
ttaagaagttttcctgatacaaaaggggtatggagataccctgtaaatattaaagaagta
tctcctttatatattcaagccctgataaattatgaagaccggtattttagatttcatccc
ggggttaatccccttgctcttgtgcgcgccctttttcaatttctggattcaggccgtttt
ctctcaggaggctcaacccttaccatgcaggcagcaaggattctgcatcctcatactaag
gatataaaaggcaaatcatgccagatgtttcgtgcttttcagcttgaatatcattttaca
aaagatgagatacttaatatttatttaaattatgcaccttttggaggccccatagaaggg
gttcaggcagcaagttttgcctatctgggcaaatctgctcttgaactaagccatgctgaa
gcagctcttttggcagttcttccccagtctcccagccgaatgaggcctgacagacatcct
gaccgggcatccagaggcagaaacaaggttttagaccggatggcaaagtttggaatctgg
gataaaagcattgttaaggatgctaaaatggaaaaggtgcttgccagatttgagccaaag
cccatgacagctccgcttcttgcaaggcgtttaaaatcccagggaaatccttttcagcct
gtgcggacttttattgatccttttatccaggaaactgttgcagacctgatttatggattt
acagcagatacaccagaacatacatcaggtgctgcaattgttgttgagaataaaagcctt
aaggtcagggcttatgtggggtctgctgatttttttaataacagcaggtttggacatgtg
gatatggtcggtgccataagatcacctggatcaacattaaagccttttttatatgccatt
gcaatggaagaaggtctgattcattcggaaagccttttggttgatgctcctttttcattc
agcgggtacaggccggataattttacccgtcatttttcaggcccggtaagtgcatctgag
gctctctgccgttcattaaaccttcctgctgttgatattatagacaggataggccctaaa
ttttttgataccaggctgcgccagggaggtctaaagcttcaatatccaaattaccaggaa
ccaaacctgacaatgatacttggcggagcaggtacatctcttgaggatttggtaagcgca
tatactgcttttgcccgcggaggcatggccggagaactcaggtttacccaaaaccagaaa
ataaagcaaaaacctatgcttaccaaaggggctgcttatataataaggcagatattagag
gaaaatccaagacctgatcttccagcaggccgcctttttcttgacagatccaggcaggct
gcctggaaaacaggaaccagttacgggttcagggatgcctggactattggtattacagac
cagtacacaattggagtctggacaggaagaccagacggcacaccctctcccgggcagtat
ggacgcgccgctgcagctcccctgtttttcagcatagttgacagcctgccgcggcaatac
acttctcccagttccattcctgatacagtcagccgcagggaaatctgctggccccttgga
attcctgccagtgaaaaatataaaacaggcaaagaccccctgtgccatcgccgccgtatg
gcatggatcctcaataatattattcctcctgcctttcctgacagaacagacgagttatgg
cagcccaacccggtatccataatgattaaccctgaaacagggctaagggtggatattgac
tgtcctgttttcaatccggtaaaaacgcttattgcccgctggcccagggcatctgaaccc
tggctttctcctgaattgcgcaggaaatcaagcattcccccttttgatcccaggtgcagc
agctcatcttttaattatgctgataatatcaaaataatggggattgaagataacacaata
tttcgtccccctggttctgaaacccgtctgccatctgtaaatcttatggcaagaggcgga
aaaaaaaatctctactggcttcttaacggccggcttatagccaggtcaggcattaatgaa
acctgtatttatcaattcaagtccccggggcaataccaattaacggttatggatcaggca
ggaaattatgattttgtccagtttacagtaatatcccctgaaatataa
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