Desulfonema limicola: dnl_35200
Help
Entry
dnl_35200 CDS
T07101
Name
(GenBank) putative ABC transporter, substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
dli
Desulfonema limicola
Pathway
dli02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
dnl_35200
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dli02000
]
dnl_35200
Transporters [BR:
dli02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
dnl_35200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
QTA81189
UniProt:
A0A975B9G3
LinkDB
All DBs
Position
complement(3738415..3739878)
Genome browser
AA seq
487 aa
AA seq
DB search
MQKKISFIFVLILIISIFTVSLSFIKAYAQGASPKDTIVIASRFNDNITLDPAENSDLSG
IEFIMNTYDRLTACDTDDFCTIKGAAAKSWSVAENGKTFTFNIRKGISFASGNPLTAHDA
VFSLHRLILLNSPGSSILSQLGFNPENIKQKIRVKDKYTLTIETDKKYPPNLLPRCLAGS
SASIVDKKEVMKQDDNNDMGNKWLKINYAGSGPYRLRQLKQGKSILLDKNNMYWAGAPKM
DKINIRNIADPSTRLMLVKMGEIDIARDVGSSLVKGLENEPGLTFKTGAKGCLYYIGINH
EEDILSNPGVRQALKYLVDYKGIADDIFNNNVLIHQSLIPRAYTKTSLENPFNYDIEKAR
SILEQAGYKQGFNISINIYNDYPFTDIAEVLKSSFAKADIKLEINYMDHARFSDNCQSKN
YDLYMDCWGADFQSPETSEFAFAWESNETSPFILMFQKTETAVIKSIVKGFDFGPGSGSS
YQYIIKE
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaaaaatcagctttatttttgttttgattttgattatttcaatatttacagtg
tccctgtcatttattaaggcatatgctcagggagcaagtccaaaagatacaattgtcata
gcatccaggtttaatgacaatattaccctggacccggctgaaaattctgatttatccggc
attgaatttattatgaatacctatgaccgcttaacggcatgtgatactgatgatttttgt
accatcaaaggagcagcagctaaatcatggtcggttgcagaaaacggtaaaacctttaca
tttaatatccgcaaaggaatttcctttgcttcaggcaatcctttaactgcacatgatgca
gttttttctcttcaccgtttaattcttttaaacagcccaggttcttcaatattatcacag
cttggatttaaccctgaaaatattaaacaaaaaatcagggttaaagataaatataccctg
actattgaaactgataaaaaatatcctccaaatcttttacccaggtgtcttgccggttca
tcagcctctattgttgataaaaaagaggttatgaaacaagatgacaataatgatatggga
aataaatggcttaaaatcaattatgcaggttcaggtccttacaggctccggcagttaaaa
caaggcaaatccatacttcttgataaaaataatatgtactgggccggggcacctaaaatg
gacaaaattaatatccgcaatattgcagatccttcaaccaggctgatgctggtaaaaatg
ggtgaaatagatattgcaagagatgttggatccagcctcgtcaagggcctggaaaatgag
cctggtttaacctttaaaaccggggcaaaaggatgtctttactatattggcataaatcat
gaagaagatattttaagtaatcctggagtcaggcaggctttaaaatatcttgtggattac
aagggtattgctgatgatatttttaataataatgtattaatacaccagtctcttataccg
agagcttatacaaaaaccagtttagaaaatccatttaattatgatattgaaaaagccaga
tcaatacttgagcaggctggttacaaacaagggtttaatataagcattaatatttataat
gattatccttttactgatattgcagaagtacttaaatcctcatttgcaaaagcagacatt
aaacttgaaatcaattatatggatcatgcccggtttagcgataattgtcagtctaaaaat
tatgatctttatatggactgctggggagctgattttcaaagccctgaaaccagcgaattt
gcttttgcctgggaaagcaatgaaacctctccatttatactcatgtttcaaaagactgaa
actgctgttataaaatccattgttaaaggctttgatttcggccctggttccggcagcagc
tatcaatacataataaaagaatga
DBGET
integrated database retrieval system
