Desulfonema limicola: dnl_38310
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Entry
dnl_38310 CDS
T07101
Symbol
pdxS
Name
(GenBank) Pyridoxal 5'-phosphate synthase, subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
dli
Desulfonema limicola
Pathway
dli00750
Vitamin B6 metabolism
dli01100
Metabolic pathways
dli01240
Biosynthesis of cofactors
Module
dli_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
dnl_38310 (pdxS)
Enzymes [BR:
dli01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
dnl_38310 (pdxS)
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Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
TMP-TENI
FMN_dh
Dus
IGPS
NMO
NanE
TetR_C_27
His_biosynth
Motif
Other DBs
NCBI-ProteinID:
QTA81494
UniProt:
A0A975GHM7
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Position
complement(4043233..4044102)
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AA seq
289 aa
AA seq
DB search
MSRETLNKGFAEMFKNGVIMDVTNPDQAKIAENAGACAVMALERVPSDIRQQNQVARMSD
PGMIQDIMNSVSIPVMAKVRIGHFMEARILEALKVDFIDESEVLTPADETRHVEKKEFSI
PFVCGARNLGEGLRRINEGAAMLRTKGEAGTGNVVEAVRHMRTILEETEALKGMDEKNLA
DKAAEYRVPLSLLKEVRELGRFPVVNFAAGGIATPADAAMMMALGVDGIFVGSGIFKSEN
PPKMAEAIVQAVIHYQDPLRLAEISKNLGTAMIGLEIKTLETQMAQRGV
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagcagggaaactttaaacaagggatttgccgagatgtttaaaaatggggttatcatg
gatgttacaaacccggatcaggcaaagattgcagaaaatgccggagcctgcgctgttatg
gctcttgaaagggttccttctgatattcgccagcagaaccaggtagcccgcatgagtgat
ccaggcatgattcaggatataatgaattctgtttccatacctgttatggcaaaagtaaga
atcggccattttatggaggcccgaatcctggaagctttaaaagttgattttatcgatgaa
agcgaagttcttacaccagcagatgaaaccaggcatgtggaaaaaaaagagttttcaata
ccttttgtatgcggggctcgtaatcttggcgaaggtctgcgccgtattaatgaaggggct
gccatgctcaggaccaaaggagaagccggtaccggcaatgtagtagaggctgtccgccat
atgcgtaccattcttgaggaaaccgaggcattaaaaggcatggatgaaaaaaatctggca
gataaagctgctgaatacagggttcccctttccctgttaaaagaagtcagggaactggga
cgttttcctgttgttaattttgcagccggaggcattgccacacctgctgacgcagccatg
atgatggcccttggggtggatggaatttttgtgggatcaggaatatttaaatctgaaaat
cctccaaaaatggcagaggcaattgtccaggctgtaattcattatcaagatccgctaagg
cttgctgagatttctaaaaatcttggaacagccatgatcggtcttgagattaaaactctg
gaaacccagatggctcaaaggggtgtctaa
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