Desulfonema limicola: dnl_38480
Help
Entry
dnl_38480 CDS
T07101
Symbol
trpB2
Name
(GenBank) Tryptophan synthase, subunit beta
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
dli
Desulfonema limicola
Pathway
dli00260
Glycine, serine and threonine metabolism
dli00400
Phenylalanine, tyrosine and tryptophan biosynthesis
dli01100
Metabolic pathways
dli01110
Biosynthesis of secondary metabolites
dli01230
Biosynthesis of amino acids
Module
dli_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
dnl_38480 (trpB2)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
dnl_38480 (trpB2)
Enzymes [BR:
dli01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
dnl_38480 (trpB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
DFP
Motif
Other DBs
NCBI-ProteinID:
QTA81511
UniProt:
A0A975B9P7
LinkDB
All DBs
Position
4060637..4061863
Genome browser
AA seq
408 aa
AA seq
DB search
MDNRGYYSQFGGSFLPEILAATFDELEKTFRNAKNDPDFWQEYEDIMSSYSCRPTPLTFA
GNLTKHFGGAKIYIKREDLNHTGAHKANNVMGQGLLVQRMGKTRVIAETGAGQHGVATAT
MAARFGFDCTIYMGEVDVERQRPNVFWMERLGATVCPVKNGTRILKDAINEAFRDWVSNM
DTTHYVLGTACGPHPFPEMVTYFQSIIGKEAREQILKIEGKLPKRIYACVGGGSNAMGLF
SGFLNDPVELVGVEAGGKGLDSGEHASRLCSKDASIGVAQGYKTYFLQNSDGQMKETHSI
AAGLDYVGVSPILSELKESGKARFEAAEDNEVVEALALTIKKEGVIPALESAHAFAQAFK
EAPKLSKDDVIIINQSGRGDKDIFTVADAFNDPGWKAFIIGKAEQYNA
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggataacagaggctattattcacagttcggaggatcttttttaccggaaatcctggct
gctacctttgacgagcttgaaaaaacatttagaaatgcaaaaaatgatccagatttctgg
caggaatatgaagatattatgtcctcctattcctgccgccccacgcctttaacctttgca
ggaaatcttacaaagcattttggcggagcaaagatttatataaaacgggaagatttgaac
catacaggcgctcacaaggcaaataatgtcatgggccagggtcttcttgttcagcgcatg
ggcaaaacaagggttatagcagaaacaggagcaggccagcacggggttgcaactgctaca
atggcagctcgttttggctttgactgcaccatttacatgggggaggttgatgttgagcgc
cagcgccccaatgttttctggatggaaaggctgggggcaactgtctgccctgttaaaaac
ggaaccaggattttaaaggatgctattaacgaggctttcagggactgggtttcaaacatg
gatacaacccattatgtacttggcactgcctgcgggccccatccttttcctgaaatggta
acatattttcaatctatcataggaaaggaagcaagggagcagattttaaagattgaagga
aaacttcctaaaaggatttatgcctgtgtaggcggaggttcaaatgcaatggggcttttc
agcggttttctcaacgatcctgttgaactcgtaggagtggaggcaggaggaaaggggctg
gattcaggggaacacgcttccaggctttgctcaaaagatgcaagcattggcgttgcccag
ggatataagacctattttctccaaaacagtgacgggcagatgaaggaaacccacagcata
gcagcagggcttgattatgtaggagtttctcccatactttcagaactcaaggaatcagga
aaagccaggtttgaggcagcagaagataatgaggttgtcgaagctcttgcccttaccata
aaaaaagaaggggttattcctgcacttgaatctgcccatgcctttgcccaggcatttaaa
gaagctccaaagctttcaaaggatgatgttataattattaaccagtcaggccgtggagat
aaggacatatttacagtggcagatgcttttaatgatccaggctggaaagcatttatcatt
ggaaaggcggaacaatacaatgcttaa
DBGET
integrated database retrieval system
