Desulfonema limicola: dnl_40870
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Entry
dnl_40870 CDS
T07101
Name
(GenBank) Beta-lactamase domain-containing protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
dli
Desulfonema limicola
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dli03016
]
dnl_40870
Enzymes [BR:
dli01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
dnl_40870
Transfer RNA biogenesis [BR:
dli03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
dnl_40870
Prokaryotic type
dnl_40870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
QTA81738
UniProt:
A0A975BAF1
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All DBs
Position
complement(4347818..4348843)
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AA seq
341 aa
AA seq
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MRPSYYPRLINNPFDDPGIIVPFSFENRSMLFDIGDITSLSARDILKISHVFISHTHMDH
FAGFDRLLRLFLGRDKEIFLYGPPGFIKNVEGKLAAYSWNLVKNYQNRFSLNVAEVHPAS
LVSRRYYCHKSFKPDKAVIHQYFNNIILHEPELSVSAVSLDHGIPCLGFSLKERFHVNIQ
KNRIEELNLKPGIWINRFKQAIYNNDDLNSDFEIIQAGEGKNRKFNLGKLAEQIALITPG
QKITYITDAAYTISNIKKIICLAKDSDFLFIEAAFLDKDKDTAFNKLHLTARQAGTLAGQ
ANVKKFIIFHFSPRYSGMEEQIYMEAVNAYELVKKENNIQA
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgaggccctcatattatcccaggctcatcaataatccttttgatgacccggggattatt
gtccctttcagttttgaaaaccggtcaatgctttttgatattggagatataacttccctt
tctgcccgtgatattctaaagataagtcatgtttttatttctcatacccatatggatcat
tttgcaggatttgacaggcttctgcgtttgtttttgggacgtgataaagaaatctttctt
tacggccccccggggtttattaaaaatgttgaaggtaagctggcagcctattcctggaac
cttgtaaaaaattatcaaaacagattttctttaaatgttgctgaagttcatcctgccagt
ctagtttccaggagatattactgccacaaaagctttaagcctgataaagctgttatacat
cagtattttaataatattatcctgcatgaacctgaattgagtgtttctgccgttagtctg
gatcacggtattccatgtcttggattttcactaaaagaaaggtttcacgtgaatattcaa
aaaaaccggattgaggaacttaatctaaaaccaggtatctggattaatagattcaagcag
gccatatataataatgacgacctgaattcagattttgaaattatccaggccggtgaggga
aaaaaccgtaaatttaatttaggaaaactggcagagcagattgccctgataacacctgga
caaaaaattacctatataactgatgctgcttataccatatctaatataaaaaaaataatc
tgtctggcaaaagattctgattttttgtttatcgaagctgcttttttggataaggataag
gatactgcatttaacaagcttcatctgacagcccgtcaggcaggaaccctggcaggacag
gcaaatgttaaaaaatttattatttttcatttttctccccgctactcaggcatggaagaa
cagatttacatggaagctgttaatgcttatgaacttgttaaaaaggaaaacaatattcaa
gcttag
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