Desulfonema limicola: dnl_40910
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Entry
dnl_40910 CDS
T07101
Name
(GenBank) Radical SAM methylthiotransferase, MiaB/RimO family
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
dli
Desulfonema limicola
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dli03016
]
dnl_40910
Enzymes [BR:
dli01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
dnl_40910
Transfer RNA biogenesis [BR:
dli03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
dnl_40910
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
HEPPP_synt_1
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
QTA81742
UniProt:
A0A975BAH0
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All DBs
Position
4351520..4352911
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AA seq
463 aa
AA seq
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MKSRNLYINTIGCQMNVYDSEQIAGLLSTLGYKLTDFEKKADMIIVNTCAIREKAEQKVF
SYLGRMADMKKKKPELIIGVGGCVAQQEGRNILKRVPWVDIVFGTHAIARLPEIVQRVES
KRCRVVDIEMTPGIDEFELPEINNQPDISRFVTIMQGCDNFCTYCVVPYVRGRETSRNPE
NIINEIKNLVKSGIKEITLLGQNVNSYGKKQGMCSFPELLEQVNAVEGLLRIRFTTSHPK
DLSQDLMYAFKNLDKLCNHIHLPVQSGSNNILKRMNRKYTRELYLEKVEQLRTICPDIAI
SSDMIAGFPGESDSDFNQTLELMKIVEYDSLFAFKYSDRPNAPAGSFSDKISESEKKARL
KEILNLQEHYTLKKNKAMIGSTAEILVDGLSKRNTEILHNNELQFTGRTSTNKIVNFIHN
LDKGCDTSKDDINNLTGKIISIEITDGFANSLKGSPVDINYLN
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcagaaatctttatataaataccattggatgccagatgaatgtatatgattct
gaacagattgcagggttattaagcacactgggctataagctgacagattttgaaaaaaaa
gctgatatgattattgtcaatacatgtgcaatcagggaaaaggcagagcagaaggtattt
agttatctcggccgcatggctgatatgaaaaagaaaaaaccagagcttattataggagtg
ggaggatgtgtagcacaacaggaaggcagaaatattttaaagcgtgttccctgggttgat
attgtgtttggaacccatgccatagcccgtctgccggaaattgtccaaagggttgaatcc
aaaagatgccgggtagttgacattgaaatgacaccaggaattgatgagtttgaactccct
gaaattaataaccagcctgatataagcaggtttgttacaataatgcagggatgtgataat
ttctgcacctattgcgttgttccttatgtaagaggcagggaaacaagccgaaatcctgaa
aatattataaacgaaataaaaaacctggtaaaaagcggtataaaagaaataactcttttg
ggacagaatgtaaacagttatggaaaaaagcagggtatgtgttcttttcctgaactctta
gaacaagtcaacgctgttgaaggattgctaagaatcaggtttaccacatcccatccaaag
gatctttcacaggatttaatgtatgcttttaaaaaccttgataaactttgcaatcatatc
catctgccggttcaatctggttcaaataatatattaaagcgcatgaaccggaaatatacc
cgggaattatatcttgaaaaagtggagcagctcagaactatctgtcctgatattgctatt
agttcagatatgattgcaggatttccaggagaatctgattcagattttaaccagaccctt
gaattaatgaaaatagttgaatatgatagtttatttgcttttaaatattccgaccgcccc
aatgccccggcaggcagtttttcagacaagatttctgaatctgaaaaaaaagcccgttta
aaggaaattcttaatttacaggaacattatacccttaaaaaaaacaaagccatgattgga
agtactgcggaaattcttgttgatggtttaagcaaacgcaatacagaaatacttcataat
aatgagctgcagtttacaggaagaaccagtaccaataaaatagtaaattttatacataac
ctggataagggttgtgataccagtaaagatgatattaataatcttaccggcaaaattata
tcaattgaaattacagatggatttgctaattcattaaaaggcagtcctgttgatattaat
tatttgaattaa
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