Desulfonema limicola: dnl_41270
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Entry
dnl_41270 CDS
T07101
Name
(GenBank) putative ABC transporter, substrate-binding protein
KO
K13893
microcin C transport system substrate-binding protein
Organism
dli
Desulfonema limicola
Pathway
dli02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
dnl_41270
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dli02000
]
dnl_41270
Transporters [BR:
dli02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Microcin C transporter
dnl_41270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
ydhR
Motif
Other DBs
NCBI-ProteinID:
QTA81778
UniProt:
A0A975GIB8
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All DBs
Position
complement(4407811..4409616)
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AA seq
601 aa
AA seq
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MNNIIKTIIFFLIILGHIPGYAQTKLPDNIQWLTNESDPVFASPNAQKGGSFNTAVMSFP
LTFRTVGPDSNSAFRSAILGSQLSLIGLHPNTLNIIPELATHWAFDNDKKTMYFKLNPKA
RWSDGRPVTADDFAYTLEFMRSKHIVAPWYNDYYTKEIEKVIVYDDHTLAVVSTKPVPDL
HLKLGLSPLPRHFYGSLDEDFVKKYNWEIVPNTGAYQIVDFKKGKYVKFKRKKDWWAQEM
MYFKNRFNVDYVIYDVVRDFNIMWEYFKKTRIDSFALTIPQYWHIKSNIPEVQKGYIHKI
WFFNNTQQSAQGLWLNQDKEIFKDANVRYAFAHAMNIEKVIEQVLRNDYFRLENGYVGYG
PYSNTSIRARRFNIDKVEHYMTGSGWSRGSDGIWEKDGQRFSVEVSYSHEEHTSRLVVLK
EDAKKAGIELNLSKLDPSAAYKKVMEKKHDAAWMGWSTSLRPRFWEHYHSINAHKPQTNN
ITNTDDPDLDKMIDIYRNSLDEQERIDLSLKLQEKVHEIGSFVPTFMIPYIRQAYWRWWK
LPDIPGTKVSGDLFEPFDSSTGGLFWYDKELHKETQKAMKKGTPFPPVTIKDETFKMKFL
N
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaataatattataaagacaattattttttttttaataatactcggtcatatacctgga
tatgcacaaacaaaacttcctgataacatacaatggctgaccaatgaatctgatccggtt
tttgcttcgcccaatgctcaaaaaggcggttcatttaatactgctgtcatgagttttccc
ctgacttttcgcacagtaggtcctgattccaacagtgctttcagaagtgccatactgggc
agccagttaagtcttatagggcttcatcccaacaccctcaatattatacctgaacttgcc
acccattgggcctttgacaatgataaaaaaaccatgtacttcaagctcaaccccaaagcc
agatggtctgacggcagacctgtaacagcagatgattttgcctatactcttgaatttatg
cgttcaaagcacattgttgcgccctggtataatgattattacaccaaagagattgaaaag
gttattgtgtatgatgaccatacccttgctgttgtcagcacaaaaccagtgcctgacctt
catttaaaacttggtttatctcccctgcccagacatttctacggcagccttgatgaggat
tttgttaaaaaatataattgggaaattgttcctaacacgggagcctatcaaattgttgat
tttaaaaaagggaagtatgttaaattcaagcgcaaaaaagactggtgggcacaggaaatg
atgtattttaaaaaccgctttaacgtggattatgtgatttatgatgttgtcagggatttt
aatattatgtgggaatattttaaaaaaaccaggatagattcttttgccctgaccattccc
cagtactggcatataaaatcaaatatcccagaggttcaaaaaggatatattcataaaatc
tggttttttaataacacccagcagtcagcccagggtttatggcttaaccaggataaagaa
atattcaaagatgcaaatgtgcggtatgcttttgcccatgcaatgaatattgaaaaggtt
attgagcaggtgcttcgcaatgattatttcaggcttgaaaatggttatgtgggatatggt
ccttattccaataccagtatccgcgcaaggcggtttaacatagataaggttgaacattac
atgacaggctcaggatggagccggggaagtgacggtatatgggaaaaagacgggcagcgt
ttttccgtggaagtatcttacagccatgaagaacatacttcccggctcgtggtgttgaaa
gaagatgcgaaaaaagcaggcatagaactcaacctaagcaaactcgacccttcagcagca
tataaaaaggttatggaaaagaaacacgatgcagcatggatgggatggagtacatccctg
agacccagattctgggaacattatcattcaataaatgcgcacaaaccccagaccaacaac
ataacaaacacagatgatcctgatctggataaaatgatagatatttacagaaattccctt
gatgaacaggaaagaattgatttgtctttgaaattgcaggaaaaggtgcatgaaatcggt
tcttttgtacccacattcatgattccctacatccgtcaggcatactggagatggtggaaa
ctgccggatatccccggcacaaaggtatcaggggatttatttgaaccttttgacagttcc
acaggaggtttgttctggtatgataaggagctgcacaaagaaacccaaaaagccatgaaa
aaaggaacaccatttccgcctgtaaccataaaagatgaaacctttaaaatgaagttttta
aattga
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