KEGG   Desulfonema limicola: dnl_41380
Entry
dnl_41380         CDS       T07101                                 
Name
(GenBank) Exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
dli  Desulfonema limicola
Pathway
dli03030  DNA replication
dli03430  Mismatch repair
dli03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dli00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    dnl_41380
   03430 Mismatch repair
    dnl_41380
   03440 Homologous recombination
    dnl_41380
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dli03032]
    dnl_41380
   03400 DNA repair and recombination proteins [BR:dli03400]
    dnl_41380
Enzymes [BR:dli01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     dnl_41380
DNA replication proteins [BR:dli03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     dnl_41380
DNA repair and recombination proteins [BR:dli03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     dnl_41380
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: QTA81789
UniProt: A0A975BAQ9
LinkDB
Position
4428166..4428672
AA seq 168 aa
MSGETFVAIDFETADRRRDSACAVALVRAESGSIIYKNSFLIQPPRKSFEFTYLHGITWN
MVADKPLFGDLWPDLEPIFDKADFIAAHNAPFDKSVLDACCYNSGLTPPDIPFKCTVVMA
RQRWGLHPAKLNNVCDYLKIPLNHHDALSDAIACAKIVLAARNGKPAK
NT seq 507 nt   +upstreamnt  +downstreamnt
atgtctggtgaaacatttgtagccatagattttgaaactgctgacagaaggcgcgacagt
gcttgtgctgttgcactggttcgtgcagaatccggcagtattatttataaaaattctttt
ttgatccagcccccaagaaaatcgtttgaatttacatatcttcacggtattacatggaat
atggttgctgacaagcctttgttcggagatttatggcctgatcttgaaccgatttttgat
aaagctgattttattgctgcccataatgccccttttgacaaaagtgttcttgatgcctgc
tgctataactcaggtttaactccccctgatattccctttaaatgcactgttgtcatggca
agacaaagatgggggctgcatcctgcaaaacttaataatgtatgcgattatcttaaaatt
cctttaaatcatcatgatgccctgtctgatgctatagcctgtgcaaagattgtacttgct
gcaaggaatggaaaaccagctaaataa

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