Desulfonema limicola: dnl_42830
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Entry
dnl_42830 CDS
T07101
Symbol
msbA
Name
(GenBank) Lipid A export ATP-binding/permease protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
dli
Desulfonema limicola
Pathway
dli02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
dnl_42830 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dli02000
]
dnl_42830 (msbA)
Enzymes [BR:
dli01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
dnl_42830 (msbA)
Transporters [BR:
dli02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
dnl_42830 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_22
AAA_16
ABC_ATPase
type_II_gspD_N0
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
QTA81925
UniProt:
A0A975BAX3
LinkDB
All DBs
Position
complement(4583567..4585339)
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AA seq
590 aa
AA seq
DB search
MPGEIEKKYIMKKIIIRTRHKKLLSMIQDNWIRLFAAMVCMLVISVTTAATAFLVKPVLD
DIFFNKDRTMLMLLPMAVLFIYFLRGVGTYGQDYLMSYVGEGIIRRLRNMLYNHIQDLPL
SFFQKEKTGVLMSRITNDVNLIREMVSSSVTSLIRDTFSIIGLTCVIFYRDWKMALFAFI
ILPIAFYPIVEFGRRVRKVSTGCQQAMAELSSFLHETFVGNKIVKAFGMEDYEKNRFAQK
TQEMFKLEMKAVVANSLSSPVMEFLAGVGIAFIIWYGGLGVVKGTSTAGTFFSFMAAVLM
LYDPVKKMSKVNNRIQQGLAAADRVFDIIEQESDIKEKSDPVEIKTKPHKVSFENVSLTY
DNQVMALKDINLDVGKGEVIALVGMSGGGKTSLVNLIPRFYDVSKGRILIDKTDIRDTSI
ASLRKQIAVVTQDTILFDNTVRNNIAYGKLHASEQEIIQAAKSAYAFDFIQSFPSQFETK
IGELGSRLSGGEKQRLCIARALLKDAPILILDEATSALDTESEMLVQKALENLMKGRTTF
VIAHRLSTISYADRVIVIVNGRIVEQGTHEELMEKKGEYYKLYQMQFKSV
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
gtgcctggtgaaattgagaaaaaatatattatgaaaaaaataattatcagaacccgtcat
aaaaaactgctttccatgatccaggataactggatcaggctgtttgctgcaatggtatgt
atgcttgtcatttctgttaccactgctgctactgcatttcttgtcaaaccagtacttgac
gatattttttttaataaagacaggacaatgctcatgcttcttcccatggctgttctcttt
atctattttctcagaggcgtgggaacctatggtcaggattatcttatgagctatgtggga
gagggtattatccgcaggttgagaaacatgctctataaccatattcaggatcttcccctg
tctttttttcaaaaagaaaaaacaggggttctcatgtcaaggattaccaatgatgtcaat
cttatcagggaaatggtttccagttcagttacaagccttatcagggatacgttcagcatt
attggtttgacatgtgtaatattttaccgggactggaaaatggctttatttgcatttatc
atactgcccatagctttttatcctattgtagagtttggcagaagggtcaggaaggtaagc
acaggatgccaacaggctatggctgaacttagttcttttcttcatgaaacatttgtaggt
aataaaattgtcaaggcatttggcatggaagattatgaaaaaaacaggtttgctcaaaag
acgcaggaaatgtttaaacttgagatgaaagcagttgttgcaaattccctgtcttctcct
gttatggaatttttagcaggggttggcatagcatttattatctggtacgggggtttaggt
gttgttaaaggtacttctactgcaggaacctttttttcctttatggcagccgttcttatg
ctctatgatcctgttaaaaaaatgagcaaggttaataacaggatccagcagggacttgca
gcagcagacagggtttttgatattattgaacaggaatctgatataaaggaaaagtctgat
cctgttgaaataaaaaccaagcctcataaggtaagttttgaaaatgtcagtctgacatat
gacaatcaggtcatggctttaaaagatattaacctggatgttggaaaaggcgaggttatt
gcccttgtcggaatgagcgggggcgggaaaacatcacttgtcaaccttatacccaggttt
tacgatgtcagcaaaggcaggatacttattgacaaaacagatataagagatacatctatt
gcatctcttagaaaacagattgcagttgttactcaggatactattttatttgacaatact
gttagaaacaatattgcatatggaaagcttcatgcttctgaacaggaaattatccaggct
gcaaaatctgcatatgcttttgattttattcaaagttttccaagtcagtttgaaacaaaa
ataggagaactgggcagccgtctttcaggaggtgaaaaacagcgtctctgtattgcaaga
gctttgcttaaagatgcgcccatacttatacttgatgaagcaacttcggctctggacacg
gaatcggaaatgcttgtgcaaaaagcacttgaaaaccttatgaaaggcaggacgaccttt
gttattgcccaccggctttctacaataagctatgctgacagggttatagtgattgttaat
ggaagaatagtagagcagggaacccatgaagaacttatggaaaaaaaaggagagtattat
aaattgtatcagatgcagtttaaatctgtataa
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