Desulfonema limicola: dnl_43040
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Entry
dnl_43040 CDS
T07101
Symbol
lysS
Name
(GenBank) Lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
dli
Desulfonema limicola
Pathway
dli00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
dnl_43040 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dli01007
]
dnl_43040 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dli03016
]
dnl_43040 (lysS)
Enzymes [BR:
dli01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
dnl_43040 (lysS)
Amino acid related enzymes [BR:
dli01007
]
Aminoacyl-tRNA synthetase
Class II (A)
dnl_43040 (lysS)
Transfer RNA biogenesis [BR:
dli03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
dnl_43040 (lysS)
Prokaryotic type
Other AARSs
dnl_43040 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Phage_Inh_N
Motif
Other DBs
NCBI-ProteinID:
QTA81946
UniProt:
A0A975BAE8
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All DBs
Position
complement(4602904..4604382)
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AA seq
492 aa
AA seq
DB search
MEKTKDVIEQRREKISELKDKNINLFPNGFIVSHTVKDIQAAIETNCDSLTDESPVFVVS
GRMMAINRFGKSSFIRFRDRTGQLQAYIRKDKVGDDAYALFKQLDVGDFVGLKGGLFQTK
TGEWTLAAQEMKLLCKATRPLPEKFHGLKDPEKRYRKRYVDLIMNTDVREIFIKRSKIVQ
AVRNFLLKQDYLEVETPMMQPIPGGAEAEPFVTHHNALGMDLFLRIAPELYLKRLVVGGF
ERVFEINRNFRNEGVSTQHNPEFTMVEFYQAYATYNDLMDLTEDMFRYVSKEVTGSTIIT
YQENTIDFGTKWERMTLAQSLEKLGGLDPALLDDKEKLLDFASKKGIKITKTGRVGKIIT
KLFDVLVEPQLIQPTFITGYPVEVSPLSRRSDEHPDLTERFELFIAGREIANGFSELNDP
EDQKSRFLQQVEDRDAGDKEAHFMDADYIEALEYGMPPTAGEGIGIDRLAMLLTDAASIR
EVILFPHMKNKQ
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaacaaaagatgtaattgaacagcgaagagagaagatatcagagcttaaagat
aaaaatataaatctttttcccaatggttttattgtttcccatactgttaaggatatccag
gcagcgattgaaactaattgcgattccctgacagatgaatctccggtttttgtggtttca
ggccgtatgatggcaataaaccggtttggaaaatcctcttttatacgattcagggacaga
accggccagcttcaggcatatatccgtaaagacaaggttggagatgatgcttatgccttg
tttaaacagcttgatgtaggagattttgtgggacttaaaggcggcttgtttcagacaaag
accggggaatggacccttgctgcccaggaaatgaaactgctttgcaaggcaacccgtcct
ttgcctgaaaaatttcacggacttaaagaccctgaaaaacgctatcgcaaacgctatgtt
gacctgattatgaatactgatgtcagggaaatatttataaaacgcagcaagattgttcag
gctgtaaggaattttctgctgaaacaggattatctggaagttgaaactccaatgatgcag
ccaattccagggggagcagaagcagagccttttgtaacccatcacaatgctctgggtatg
gatctttttttgaggattgcccctgaattatatctgaaacgtcttgtggtaggcggtttt
gaacgtgtatttgaaatcaaccgcaatttcaggaatgaaggtgtttccacccagcataac
cctgaatttacaatggtggagttttaccaggcatatgcaacatataatgacctcatggat
ttaaccgaagacatgttccggtatgtttccaaagaagttacagggtcaacaataataacc
taccaggaaaatacaattgattttggcaccaaatgggagagaatgacccttgcccagtcc
cttgaaaaacttggaggccttgatccagccctgcttgatgataaagaaaagctgcttgat
tttgcatctaaaaaaggtattaaaataacaaaaacaggccgggttggaaagattattacc
aaattgtttgatgtcctggttgaaccccagttaatacagcctacctttattactggttat
cctgttgaggtttctccgctttcaagaagaagtgatgaacatcctgatttaactgagcgc
tttgaattatttattgcaggccgtgaaattgccaatggtttttcagagctgaatgatcct
gaagatcagaaatccaggtttttacagcaggttgaagaccgtgatgcaggagataaggaa
gcccattttatggatgctgattatatagaagccctggaatacggcatgcctccaactgct
ggagaaggcataggcatagaccgtcttgcaatgctgctgacagatgctgcatctatcaga
gaagtaatcctgtttccccatatgaaaaataaacagtga
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