Desulfonema limicola: dnl_43430
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Entry
dnl_43430 CDS
T07101
Name
(GenBank) YcaO-like domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
dli
Desulfonema limicola
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dli03009
]
dnl_43430
Ribosome biogenesis [BR:
dli03009
]
Prokaryotic type
ribosomal protein modification factors
dnl_43430
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
TPR_1
TPR_2
TPR_8
TPR_12
TPR_19
TPR_11
TPR_6
TPR_CcmH_CycH
TPR_14
TPR_17
TPR_7
ANAPC3
TPR_16
TPR_10
TPR_9
ARM_TT21_C
NatA_aux_su
TPR_15
TPR-S
SRP_TPR_like
TPR_NUP160_120_M
T7SS_EccA1_N
ARM_TT21_N
Clathrin
Motif
Other DBs
NCBI-ProteinID:
QTA81982
UniProt:
A0A975BAX4
LinkDB
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Position
complement(4643373..4645103)
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AA seq
576 aa
AA seq
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MTKIILNEAVKKDTFDQDKIISPGETVRRFKDKLKNIDMDILEETVRIDNGRLDIPVYFS
NCGSDAQAVIGNKKQMGKGGTPQQAEASAVMELAERFSFFSFYQNPDNFIQDQYKNIRNQ
AIDFDQIIQSVHDTSQDTDQAAKIFENLDLRWAQGYNLTKNKEVLIPFDWFFTINQFNGA
CAGNCNEEALSQGICEVVERHVSSLVSQNNLDVPLIDPESVTDPLCLEMLEKYKKAGIKL
WISDFTLNTGIPTIGVLAYDPSTFPHKSEIVWTAGTTPNPQKALSRALSETAQLGGDFNS
GSNYVASGLPKFSDIKQAEFITSAGRKNPITSLPDLSDNNIKTEVQNLISILAQKNMDVF
AVNTTHPVLEIPCFYIIIPGAHFRERAENSSAGMFCTKLIKENNPAGLAILELKKAEKLL
PDKYYIQFYLGTSYLDLNDPDTALEHLKKALELDPAPQDIPSIYSYMGVCLRDLEKYQEA
LDLLEKGISMDSERTDIHNLMGFCYFKLKEHEKAIECFQDVLKINPGSAIDYANIASNYR
EMGWTEKAIAYYEMALGIDGSIDFARDSLERLKKKR
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgactaaaataatattaaatgaagctgttaaaaaggacacctttgaccaggataaaatt
atttcaccaggagaaacggtcagacgttttaaagataaattaaaaaatatagatatggat
atattggaggaaactgtcaggattgataacggccgtcttgatattcctgtttacttcagc
aattgcggatctgatgcacaggctgttattggcaataaaaaacaaatgggcaaaggcgga
accccccagcaggctgaagcaagtgctgttatggaactggcagagcgtttcagttttttc
agtttttatcaaaatcctgataattttatacaagaccaatataaaaacatcaggaaccag
gccattgattttgatcagatcattcaatctgttcatgatacttctcaggatacagaccag
gcagcaaaaatatttgaaaatcttgatctcagatgggcacaagggtataatcttacaaaa
aataaagaggttttaataccttttgactggttttttaccataaatcaattcaatggagca
tgtgcaggaaactgtaatgaagaagccctgagccagggtatttgtgaggttgtggagcgc
catgtatcttctttggtaagtcagaataatctggatgttcccttaattgatcctgaatct
gttaccgaccctctctgcctggaaatgcttgaaaaatataaaaaagcaggtattaagctg
tggatctcagattttacgcttaataccggcatccctacaatcggtgtcctggcctatgat
ccttcaacctttccccataaaagcgagattgtatggacagcaggaacaaccccaaatccc
cagaaagctttaagccgtgccctgagtgaaacagcccagctgggaggtgattttaactca
ggatcaaattatgttgccagcggacttcccaagttttcagatattaagcaggctgaattt
ataaccagtgccggcagaaaaaatcccataacatcacttcctgatctttctgacaataat
ataaaaacagaggttcaaaaccttatttctattcttgcacaaaaaaatatggatgttttt
gcagttaatacaacacatcctgttcttgaaattccctgtttttatataataataccagga
gcgcatttcagggaaagagctgaaaacagcagtgcaggaatgttttgtacaaaattgata
aaagaaaacaatcctgccggacttgccattcttgagcttaaaaaagctgaaaaactgctt
ccagataaatactatatccaattttatcttggcacatcctatcttgacttgaatgacccg
gacacagctttggaacatcttaaaaaagcacttgagcttgatcctgccccccaggatatt
ccaagtatttattcctatatgggagtatgtctaagggatttggaaaaatatcaggaagct
ttggatttgctggaaaaaggaataagcatggattccgaaagaactgatattcacaatcta
atgggcttttgctattttaaactcaaagagcatgaaaaagccattgaatgctttcaagat
gtgcttaagataaatccgggttcggcaattgattatgcaaacattgcatctaattacagg
gaaatgggctggacagaaaaagccatagcttattatgaaatggcccttggtattgatggg
tctattgattttgccagggatagtctggagaggttgaagaaaaaacggtag
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