Desulfonema limicola: dnl_43630
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Entry
dnl_43630 CDS
T07101
Symbol
pbpA2
Name
(GenBank) Penicillin-binding protein 1A
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
dli
Desulfonema limicola
Pathway
dli00550
Peptidoglycan biosynthesis
dli01100
Metabolic pathways
dli01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
dnl_43630 (pbpA2)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
dnl_43630 (pbpA2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
dli01003
]
dnl_43630 (pbpA2)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dli01011
]
dnl_43630 (pbpA2)
Enzymes [BR:
dli01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
dnl_43630 (pbpA2)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
dnl_43630 (pbpA2)
Glycosyltransferases [BR:
dli01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
dnl_43630 (pbpA2)
Peptidoglycan biosynthesis and degradation proteins [BR:
dli01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
dnl_43630 (pbpA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
TPR_19
TPR_16
AAA_16
ANAPC3
ATPase_2
TPR_CcmH_CycH
TPR_2
TPR_14
T6SS_VasJ
AAA_22
TPR_8
TPR_17
TPR_4
ARM_TT21_2nd
TPR_11
ARM_TT21
TPR_12
ARM_TT21_N
TPR_20
AAA_14
HEAT_2
TPR_6
HEAT_Nup120
DUF815
TPR_21
Motif
Other DBs
NCBI-ProteinID:
QTA82002
UniProt:
A0A975GI02
LinkDB
All DBs
Position
complement(4665257..4668901)
Genome browser
AA seq
1214 aa
AA seq
DB search
MTAFSNPYITNTQVGFTKAFTGRTLIIKGLSDFLKSAHANTMVIYGHRCIGKTSVLHHLK
GRLLNSSVFVPVYFDLNEKASQALDLILMQLVREIEKIPDFSGLTDKQNLSSESLYTVFP
NIISAIPGKITLVLIFDEFEESDWQYLEKKFLFYKYMNKIAGINLPNIKFIFALGRHHDD
FDSIYQPFLNHGCIEYISLLSKEETKKLIRCSEKDNSLIWPDAQISSVINITGGHPYLTQ
KICQVIWDRIYQTHHNNIPKVVFKDMGLGFVHAMKGADKSLNWFWNGLGPWEKVLVSALA
EGGFQGVEPEELKNRLASYEYFTRNGSLQEITAHLERSGVIQAEKDRGYSIQVNMIYRWV
MAKKPFDRIKEELNHKADELVQAACDLSKEKKLNQAAHALRQAADINPEHPRAMYFLAKI
LLKQGNAEQAVQILEKLYKSSYPSIRALLIQALLSLSDQTSDEEKKILILEKILNIQPGQ
PRARSIYWKIFELRGDKALENNDLYQAFADYQKAGADQKALRVQDLIDDLEYEVRYKKKR
RVKSSAGFIRKLAGLLCVFFMIFMAGIYGIYLVYKDLSQGLPKIYSLKDYNPPVITSVYS
DDNRKIAEFYKERRVVISLSEISQTLINAFISAEDSRFFSHEGVDILGITRAFFKNIEAG
AVIQGGSTITQQVIKSFLLSSEKSYERKIKEAVLAYRIDKAFTKEEILILYLNQIYLGYG
AYGVEAAAENYFGKSAKTLTLPECAMIAGLAKAPSKDSPVSDLKRAKIRQKYVLNRMAQE
GYISYEDAKTAFEAALDIKPRRNWYIDGVPFYTEHIRQYIEQEYGEQALYTDGLKIYTSV
NIEMQDIAEQELEKGLKELEKRHKYPHKIRPQGALLCMEIGTGHVKAMVGGRDFTISQFN
RAAQSRRQPGSAFKPVIYAAALDKGYTPATMLYDTPVAYPDNGRMWYPGNYDNKYYGPLL
LRKAFAQSRNIPVIKVLKDIGVDYAIDYAQKLGINSKLDKGLALALGASGISLLELVNAY
SVFANQGRLIKPVFITKIIDRSGKEIYKHQPEIIQAIDKTTAYLMTSLLQSVVQNGTGYK
VRNLNRPAAGKTGTTNDFRDAWFIGYTPEYITGTWVGFDIERSLGKSETGSKAASPIWLG
FMEKILKYSPVKDFNAPDKGIVYASIDTATGLLPIPESSNIIHECFKDGTVPKRYTPRPV
VVITEPEAFFKSGL
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgacagccttttccaatccatatattacaaatacccaggtaggttttaccaaagcattt
accggaagaacattgattataaaaggtctgtctgattttcttaaatctgcccatgcaaat
accatggtaatttacggacaccggtgtattggaaaaacatctgttttacaccatcttaaa
ggcagacttttaaacagcagtgtgtttgtgcctgtttattttgatcttaatgaaaaagca
tcccaggcccttgacctgattttgatgcagcttgtcagggaaattgaaaaaatccctgat
ttttcaggtttgactgacaagcaaaacctttcatcagaatctttatacactgttttcccc
aatatcatatctgcaattccaggaaaaattacccttgtgctgatttttgatgaatttgaa
gaatctgactggcagtacctggaaaaaaagtttttattttataaatatatgaataagatt
gccgggattaatctgccgaatattaaattcatatttgccctgggccgtcatcacgatgat
tttgacagtatatatcaaccttttttaaatcatggctgtattgaatatatatccctttta
tcaaaagaagaaactaaaaaacttatacgctgttcagaaaaagataattccctgatatgg
cctgatgcccagatttcatcagtaatcaatattaccggcggtcatccataccttacccag
aaaatatgccaggtaatctgggacaggatttatcagacccatcataacaatattccaaag
gttgtgtttaaagatatgggactgggttttgtccatgccatgaaaggagcagataagagt
cttaactggttctggaacgggcttggcccctgggaaaaagtattggtttcagccctggca
gaaggaggtttccagggtgttgaacctgaagaactaaaaaaccgcctggcttcatatgag
tattttactagaaatggaagcttgcaggaaataactgcacatcttgaaagaagcggggtt
atccaggctgaaaaagaccggggatacagtattcaggttaatatgatatatagatgggtt
atggctaaaaagccttttgaccgtattaaggaagagcttaaccataaagccgatgagctt
gttcaggctgcctgtgatctgagcaaagaaaaaaaacttaatcaggctgcccatgcactt
cgtcaggctgctgatattaatcctgaacacccaagagccatgtattttcttgcaaagatt
cttcttaaacagggaaatgctgaacaggctgttcaaatccttgaaaaactttataaatcc
agttatccctctattcgtgccctgttaatccaggctcttttatccctgtcagatcaaacc
agtgatgaagaaaaaaaaatccttatcctggaaaaaatactcaatatccagccaggccag
cccagggcacgctcaatatattggaagatatttgaattgcgcggagacaaggctcttgaa
aacaatgatctttaccaggcttttgcagattatcaaaaagcaggggcagaccagaaagct
ctgagggttcaggacttaatagatgatctagaatatgaggtcagatataagaaaaagcgc
cgggtcaaatcatctgcgggctttatcaggaagcttgcaggactattatgtgtgtttttc
atgatctttatggcaggaatctatggcatttacctggtttataaagatctcagccagggt
cttcccaaaatttattcactcaaggattacaatcccccggtaattacaagtgtatattca
gatgataacaggaaaattgctgaattttacaaagaaagacgggttgttatttccctttca
gagatatctcaaacccttattaatgcttttatttcagcagaagattcccgttttttttcc
catgaaggggttgatattctcggtattaccagggcgtttttcaaaaatattgaagcaggg
gcagtaatccaggggggcagtaccataacccagcaggtgataaaatcctttttgctttca
tctgaaaaaagctatgaaagaaagataaaagaagcagttttagcctatcgtattgacaag
gcatttaccaaagaagagatattaatactttatctaaatcagatctacctcggctatggt
gcatacggggttgaagctgccgcagaaaactattttggaaaatctgcaaaaacccttacc
ctgcctgagtgtgccatgattgcaggtcttgccaaggctccaagcaaggattctcctgta
tcagatttaaaacgcgcaaaaatcaggcagaaatatgtattaaacagaatggctcaggaa
ggatatataagttatgaggatgcaaaaacagcttttgaagcagctttggatattaaaccc
cgcaggaactggtatattgacggggttcctttttatacagagcatatccgccaatatatt
gaacaagaatacggtgaacaggctctttatacagatggcttgaaaatatatacaagtgtt
aatattgaaatgcaggatatagcagaacaggaattggaaaaaggattaaaggaacttgag
aaaagacacaagtatccccataagattcgtcctcagggtgcccttttgtgcatggaaatc
ggcacaggacatgtaaaagcaatggtaggaggccgggattttaccataagccagtttaac
cgggcagcccagtcaagacggcagccaggttctgcatttaaacctgttatatatgcagcc
gcgttagacaagggttatacccctgccaccatgttatacgacacccctgtagcataccct
gataacggcaggatgtggtatcctggtaattatgataataaatactacggtcccctgctg
ttgagaaaagcatttgcgcaatccaggaatatacctgtgataaaggtattaaaagatata
ggtgtggattatgccattgactatgcacaaaaacttggaattaattcaaaactggacaaa
ggactggcccttgcattaggtgcttcaggcatatccctgcttgaacttgttaatgcttat
tcggtttttgcaaatcagggcagacttataaaaccagtgtttataacaaaaattatagac
cggtcaggaaaagaaatttataaacatcaacctgaaataatccaggcaatagataagact
acagcttatcttatgacaagccttctccagagcgtagtccagaatggaactggttacaaa
gtcaggaacctaaaccggcctgcagcaggaaaaaccgggacaaccaatgatttcagggat
gcctggttcataggttatacccctgagtatattacaggaacctgggtaggatttgacata
gaaagatctcttggaaaatctgaaaccggctcaaaagcagccagtcccatatggcttggt
tttatggaaaaaattcttaaatactctcctgttaaagattttaatgccccggataaagga
attgtatatgccagcatagacacggctacgggactgcttcctattcctgaatcctcaaat
ataatccatgaatgttttaaagatggaactgtaccaaaaagatatactccaagacctgtt
gttgtcataacagaacccgaagctttttttaagagcgggttgtaa
DBGET
integrated database retrieval system
