KEGG   Desulfonema limicola: dnl_45110
Entry
dnl_45110         CDS       T07101                                 
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
  KO
K03702  excinuclease ABC subunit B
Organism
dli  Desulfonema limicola
Pathway
dli03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dli00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    dnl_45110 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dli03400]
    dnl_45110 (uvrB)
DNA repair and recombination proteins [BR:dli03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     dnl_45110 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      dnl_45110 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd Helicase_C UvrB ResIII UVR DEAD DUF87 AAA_30 Kinesin Microtub_bd AAA_22 AAA_7 DUF2740
Other DBs
NCBI-ProteinID: QTA82144
UniProt: A0A975BAQ5
LinkDB
Position
complement(4826826..4828835)
AA seq 669 aa
MSLFKIVSEFTPKGDQPKAIKGLCRNLSSGSTHNVMLGVTGSGKTYTMANVIEKLEKPAL
IMAPNKTLAGQLYNEFKNLFPENLVEFFVSYYDYYQPEAYIPTSDTYIQKDSSINEMIDK
LRHSATRSVLSRRDVIVVASVSCIFGLGAPEDYLGMRIDLDSDMEMDRDRLLMKFVDMQY
ERNDMDFHRGVFRVRGDRVELFPAYEEDRAVRIEFFGDEIESIAEIDPLRGHVIKELDHI
TLFPASHYVTSKTTLRRAVESIKEELKARVEYFRNENKLIEAQRIEERTNFDLEMMLELG
YCNGIENYSRHLTGRNPGEPPPTLLDYFPDDFLLFIDESHIAVPQIRGMYNGDHSRKKTL
VEYGFRLPSALDNRPLKFDEFQKRVSQVVYVSATPADYEMEKGKDDIVELIVRPTGLIDP
VIDVRKAKYQVDDLFDEIKLRVNKNERVLVTTLTKRMAEDLTDYYSELGIKVQYLHADVS
TLERMEIIQDLRSGRFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSERSLIQTCGR
ASRNVNGQVIMYADIITKSMQKAIDETKRRIRIQTAYNKNHNITPSTISKKISQIFDFPA
QPDKPSGFDMVAESIKKYGSKNGSVNDIDRIIKKLEHEMSKAAKDLEFEKAARLRDEIKE
LKKMQVFDI
NT seq 2010 nt   +upstreamnt  +downstreamnt
atgtctttatttaaaattgtatctgaatttacgccaaaaggggatcagcctaaagctata
aaaggattgtgccgaaatctttcatcaggcagcactcataatgtcatgctgggagttaca
ggttcaggcaaaacctatacaatggctaatgttattgaaaaacttgaaaaaccagctctc
ataatggctcccaataaaacccttgcaggccagttatataatgaatttaaaaatcttttt
cctgaaaacctggttgaattttttgtaagttattatgactattatcagcctgaagcctat
attcccacaagcgatacctatatccagaaagattcttctataaatgaaatgattgacaag
ctccgccattctgctaccaggtctgtattatcgcgcagggatgttattgttgttgccagt
gtgtcctgtatatttggtctgggagcgcctgaagattatcttgggatgcgtattgatctt
gattctgatatggaaatggacagggacagactgcttatgaagtttgtggatatgcagtat
gaacgcaatgatatggattttcacaggggagttttcagggtaaggggagacagggttgag
ctgtttcctgcttatgaggaagacagagctgtccgcattgagtttttcggggatgaaata
gaatccattgctgaaatagatccgctcagaggacatgtgataaaagagctggatcatata
actctttttcctgcaagtcattatgttacatcaaaaacaaccttgagacgcgctgttgaa
tctattaaagaggaattgaaagccagggttgagtattttagaaatgagaataaattgatt
gaagcccagcgcattgaagaacggacaaattttgacctggaaatgatgctggaactaggt
tattgcaatggaatagagaactattcacggcaccttacaggaagaaatcctggagaacct
ccgccaacacttcttgactattttcctgacgattttcttttattcatagatgaaagccat
attgcagtaccccagatacggggaatgtacaacggggatcattcaagaaagaaaactctt
gtggaatacggtttccgtcttccctctgccctggataaccggcctttgaaatttgatgaa
tttcaaaaaagggtgtcccaggttgtttatgtatctgcaacacctgctgattatgagatg
gaaaaaggcaaagatgatattgttgaacttatagttaggcccactggacttatagaccct
gttatagatgtgcgaaaagcaaaatatcaggtagatgatctttttgatgaaatcaagctc
cgggttaataaaaatgaaagggttcttgtaacaaccctgacaaaacgcatggcagaggat
ctgacagattattactcagaactgggaatcaaggttcaatatcttcatgcagatgtcagc
actctggagcgcatggaaattattcaggatttaagatcaggcagatttgacgtacttgta
ggaataaaccttctcagggaaggtcttgatctgccggaagtgtccctggttgctattctt
gatgcagataaggaaggttttctccgttctgaaagatccttgatccagacctgcggaaga
gcttctcgcaatgtaaatggacaagttatcatgtatgcagatataataacaaaatccatg
caaaaagctattgatgagacaaagcgccgaataaggattcaaacagcctacaataaaaat
cataatattactccatctactatcagcaaaaaaatatcccagatctttgattttccagct
cagcctgataaaccttctggttttgatatggttgcagaatcaataaaaaaatacgggtca
aaaaatggttctgttaatgatattgacaggattataaaaaaactggaacatgaaatgagc
aaagctgcaaaagatcttgaatttgaaaaagcagccaggctccgggatgagattaaagaa
ctgaaaaaaatgcaggtgtttgatatttaa

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