Desulfonema limicola: dnl_46960
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Entry
dnl_46960 CDS
T07101
Name
(GenBank) Two component system response regulator, PAS and GAF and GGDEF and EAL domain-containing
Organism
dli
Desulfonema limicola
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
Response_reg
GAF_2
GAF
PAS_3
PDE8A_N
PAS
PAS_4
PAS_9
Nre_C
VpsR
Motif
Other DBs
NCBI-ProteinID:
QTA82322
UniProt:
A0A975BBI8
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Position
complement(5035973..5038531)
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AA seq
852 aa
AA seq
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MNKKPIALIADDDFTIRLLACEALEQADFEVKEAEDGKQALEIFKQVQPEIVLLDVKMPF
LSGFEVCKAIRQYPNGKNLPILMVTGADDIESIRSAYDAGATDFMTKPINWLILVQRVRY
MLRASRNVEKLRKSEAILATAQKIARMGSWEMDIKSNEFRCSEEICRIYGLNHCNIKKYE
DLFESMKDDDRKEIIKKYQQLIHQAVPFQIDHQIFLPDGNERIVNQQASASVDENGHIQQ
LIGTIQDITERKLAESLETDKNRVLEMIIRNKNLSDIMKELVTIIETQEPEAFCSIYLIK
ENRFYLQAGSLMAEPFFQAMDAQPVHPETGGSPSIAAYTGDMVIISDIKNSNLWKKKRDA
ALNHGIRACCSLPVISGQGQILGVISAFYRKICHPDNSVVKLLEVLAKLASVAIERRILS
EKLEHQARHDVLTGLPNRAAISEYLNQALIQASKTSEKVAVFFIDLDRFKHINDSLGHPV
GDGLLKEVTERLKTCIHENSIMGRMGGDEFMHVLKGIKNQENITKAALKILELVAPPFKV
KDQNLYLGASIGISIYPDDGTDAMSLQKNSDTAMFYAKNKGGNRFQFFSQEMNMAAIERL
EIENELRKAVEQGDFELHYQPKYNLKDNSLAGFEALLRWNHHSRGRVPPVKFIPVAEESE
LIIPIGTWVLREACRQNSEWEKAGFGAFKIAVNVSVVQFLQKDFIEIVETALKQYNLPPQ
RLELEVTESVVISDLSIVSESLSKLQSMGIITTIDDFGTGYSSMSYLNQLPINCLKIDRS
FIVKLSGEKDIVDRGKMMVHTIVKLAHDLNFTVVAEGIEEHEHLEFLKEIECDIGQGYYF
SVPLSAKEVEKM
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaacccattgccttgatagcagatgatgattttactataaggcttcttgcc
tgtgaagctcttgaacaggctgactttgaagttaaggaagctgaagacggaaaacaggct
cttgaaatttttaaacaggtacagccggaaattgtgctgttagatgttaaaatgcctttt
ttaagcgggtttgaagtatgcaaagcaattcgtcaatatcctaatgggaaaaatcttcca
attcttatggtaacaggtgcagatgacatagaatccatacgcagtgcttatgatgcagga
gccactgattttatgacaaaacctattaactggcttatcctggttcagcgtgtccgctac
atgctccgtgcaagcaggaatgttgaaaaattgagaaaaagcgaggctatcctggcaaca
gctcagaaaattgccaggatgggcagttgggagatggatattaaatccaatgaattcagg
tgttcagaagaaatctgccggatatatggattaaatcactgcaatataaaaaaatatgaa
gatttatttgaatccatgaaagatgatgacagaaaagagataataaaaaaatatcagcag
ttaatacatcaagctgtgccttttcaaatagatcatcagatctttcttcctgacggaaat
gaaagaattgtaaaccagcaggccagcgcctctgttgatgaaaatggacatattcagcag
ttaataggcactattcaggatattactgaacgcaaacttgcagaatcccttgaaacagac
aaaaaccgggttcttgaaatgataattagaaataaaaacctcagcgatattatgaaagaa
ctggtaacaattatagaaacccaggaacccgaagctttctgctctatttatcttatcaag
gaaaaccgtttttatctgcaggcaggctcgcttatggcagaacctttttttcaggcaatg
gatgcccagcctgttcaccctgaaacaggaggttctccttccattgctgcctatacagga
gatatggtaattatttcagacattaaaaacagtaatctgtggaaaaaaaaacgagatgca
gctttaaatcacggtataagggcatgctgctccctgcctgttatttcaggacaagggcag
atacttggtgttatatctgctttttatcgaaaaatctgccatcctgataattctgtggta
aaactgcttgaagttttggcaaaacttgcatctgttgccattgaacgcagaatactttct
gaaaaactggaacaccaggcccgccacgatgttctcacaggtctgccaaacagagctgca
atctccgaatacctgaaccaggctttgatccaggcatctaaaaccagtgaaaaggttgct
gttttctttattgacctggatcgtttcaagcatataaatgattcattgggccatcctgtt
ggagacgggttgttaaaagaagttacagaacgattaaaaacctgtatccatgaaaacagc
attatgggcaggatggggggggatgaatttatgcacgttctgaaaggcataaaaaatcaa
gaaaatattaccaaagctgccttaaaaattcttgagctggtagcccctccttttaaagta
aaagatcaaaacctttatcttggagccagtattggtataagtatttatcctgatgatgga
actgatgccatgtccctgcaaaaaaattctgatacagcaatgttttatgcaaaaaataaa
ggcggaaaccggtttcagtttttttcccaggaaatgaatatggcggcaatagagagactg
gaaattgaaaatgaattaagaaaagctgttgaacaaggagattttgaacttcattatcag
cctaaatataatctaaaagataactcccttgcaggatttgaagctctcctgcgctggaat
caccattcacggggccgcgtaccgccggtcaaattcattcctgttgctgaagaaagtgaa
ttaataatcccaattggtacatgggtgcttcgtgaagcatgccgtcaaaatagtgaatgg
gaaaaagcaggttttggagcttttaaaatagctgttaatgtctctgtagtccagtttttg
caaaaagactttattgaaattgtggaaacagccttaaaacaatataatctgcctccccaa
aggctggaacttgaagtaacagaaagcgttgttatcagtgatttatctattgtatcagaa
tctttgtcaaagctgcagtcaatgggtattataacaactattgatgattttggcacaggt
tactcatccatgtcttatcttaaccagcttcccatcaactgccttaaaatagaccggtca
tttattgtaaaactgtcaggggaaaaggatatagttgaccggggcaagatgatggttcat
actattgtaaaacttgctcatgatttaaattttactgttgtggcagaaggtattgaagag
catgaacatcttgaatttttaaaagaaatagaatgtgatattggacagggatattatttc
agtgttcccctgtctgctaaagaggttgaaaaaatgtaa
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