KEGG   Desulfonema limicola: dnl_47250
Entry
dnl_47250         CDS       T07101                                 
Name
(GenBank) Type I restriction endonuclease domain-containing protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
dli  Desulfonema limicola
Brite
KEGG Orthology (KO) [BR:dli00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dli02048]
    dnl_47250
Enzymes [BR:dli01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     dnl_47250
Prokaryotic defense system [BR:dli02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   dnl_47250
SSDB
Motif
Pfam: SWI2_SNF2 ResIII T1R_D3-like HSDR_N DEAD DUF5814 AAA DUF4502
Other DBs
NCBI-ProteinID: QTA82351
UniProt: A0A975BBF8
LinkDB
Position
complement(5070001..5073216)
AA seq 1071 aa
MSELHLQDRFLIPFFQKELGYQEVRANTVSNSLIIEEDLEAFISQTQLNAKPYEKLLKKY
KGDKQKLLADLIELIQERSGSTRNMALFLNANKSVTLKGIKLHLFYTSDSLIHANTLFEE
NIFSVIQELHYKYYYEDKQIFYFRPDICLFINGIYLGYSELKSNFSNQNARKNGRRKVIK
DYCNAVKTYYDYFDSNEMLSEKEKEFYRKDFLKVFERAIHITTTDVGETYIIRTISDFFD
RILNAYRKGKIDIEEQKNKIEDEFKPYPLLNPHANKKNKLKEIFTYHYGKYFIEKEILYY
NFIERDVYVVKKTKTLKDEKGNLIAPRPKQKFGTDKIMGKIDEFLAHENEDDYFEKLLEK
QLAGVSEAKKKELLEKRKSYANNKNVYSLLMQYAPGFGKSNIIGWTALQLKDLMRDGEYV
YDKILIVVDRLQLRGQIDSKMLNMNIDNRMYIEAFNKKTFQEALISDTRMVIVNLQKFGS
AREMLDSEVLKNLAGMRIVFLIDEIHRSNSGDQHEEMVSIFDELQTPFDSDEEYKENRKK
KNLIIGFTATPNDHALARFGEFSAYAENEKLWVPFDTYSMVEAIEDGYILNPLKNIVPIA
SKMLYDIPPNKLKGFKEKEYKDAYKKQIYENRERIDAIAEKIADLLVKDVYHRIRGTGKG
MLAVYSIKSAIAYKEAVTKHFNKLVKLPKYEKYAKAPIHVVYSSSQDEQSANGLNDGLSE
EKVLQNFAQKKNGLIIVVAKLQTGFDEKKLYSIFLDKEVRGINAIQTIARVNRKTKYKND
CKIFDFSYDNVNVQNIKDAFEHFSDMVVSDFDPFSDRNILEILLDELRKSGSYTKFYKLY
MEIYNDKDRTDNPASYFDLETSIEKYIKANPKHTADTKAKASQYFTILNRIEYVIKLDKK
FSETVFLKFWEFFNTIYNRLNPKKNEKDSIEVYFDDKIGIVEVEAQKPKKKRKKKTKVAT
GDIGGGGQQLDILEIIKARNKKEEKIGELIKDFEKKIEAFFKYVEDSKEGKRLIVKINSH
IPEEEIKEDFAKIYRRYKAFNKKKVGDYFFKETKDLVEKLCDDFEIRVQGN
NT seq 3216 nt   +upstreamnt  +downstreamnt
atgagcgaacttcatctgcaagacaggtttttaattccattttttcaaaaagaattgggt
tatcaggaagtcagggcaaatactgtaagtaattctttgattattgaagaagaccttgag
gcattcatatctcaaacccaactcaatgcaaaaccctatgaaaaattgttaaaaaaatac
aaaggggataaacaaaaactacttgcagacctgattgagcttattcaagagcggagcgga
agcacccggaatatggcattgtttctcaacgcaaataaatctgtaacattaaaaggtatc
aagctacaccttttttatacaagtgacagcttaatacacgccaataccttatttgaagaa
aacatattctcagttatccaggaattgcattataaatactattatgaagataaacagatt
ttttatttccgcccggatatttgcctatttataaacggtatttacctgggatacagtgaa
cttaaatcaaactttagcaatcagaatgccaggaaaaacggacgaagaaaggtaataaag
gattattgtaatgctgtaaaaacatattacgattattttgacagcaatgaaatgctcagt
gaaaaagaaaaagagttttaccgtaaagattttttaaaagtatttgaaagagccattcac
ataactaccactgatgttggtgaaacctatataatccgaaccatttcagatttttttgac
cgaatactcaatgcctaccgaaaaggaaagatagacatagaggaacagaaaaataaaata
gaagatgaatttaaaccgtatcctttgttaaatcctcatgctaacaagaaaaacaagctg
aaagaaatatttacttatcattatggcaaatactttattgaaaaagagatattatattac
aactttattgagcgtgatgtctatgttgttaaaaaaactaaaacacttaaagacgaaaaa
gggaacctgatagcaccaagaccaaaacaaaaattcggaacagataaaataatggggaag
atagatgagtttcttgcccatgaaaatgaagacgattattttgagaagttattagaaaaa
caattggctggagtttcagaagcaaagaaaaaggaactgctggaaaaacgtaaatcttat
gccaataacaaaaacgtctattccctgctgatgcagtatgcacccggttttggaaaatcc
aatattattggctggacggccttgcaattaaaagatttaatgcgtgacggtgaatatgtt
tatgataaaatccttattgtagttgaccggttacaactccgaggacaaattgattctaaa
atgcttaatatgaatattgataaccgcatgtatattgaggcatttaacaagaaaaccttt
caggaagcactaatttcagatacccgtatggtgatagtaaatttacagaaattcggttct
gcacgggaaatgcttgattcagaagttctaaaaaaccttgcaggaatgagaattgtattt
ttaattgatgagatacatcgttcaaacagcggagatcagcacgaagaaatggtcagcata
tttgatgaactgcaaacaccgtttgatagtgatgaagaatacaaagaaaaccgcaaaaaa
aagaatcttattatcggtttcacagccacacccaacgatcatgccctggcccgatttggt
gaattcagcgcttatgctgaaaatgaaaaactatgggttccatttgatacttacagtatg
gtagaagctatcgaagacggatacattctcaatccactgaaaaacattgtccccatagcg
tctaaaatgctgtatgacattcctcccaacaaacttaaaggctttaaagaaaaagaatat
aaagatgcctataaaaaacaaatatacgaaaatcgtgaacgtattgatgccattgcggaa
aaaattgctgacctgctggtaaaagatgtatatcatagaatacgtggcacaggaaaaggt
atgcttgctgtttattccattaaatctgctattgcatataaagaagctgtaacaaaacat
tttaataaactggttaaactgcccaagtatgaaaaatatgcaaaagcccctattcatgta
gtctattcaagcagtcaggacgaacaaagcgctaatggccttaatgatggattgagtgaa
gaaaaggtattacagaattttgcccagaaaaaaaacggcctgattattgtagtagccaaa
ttgcaaacaggctttgacgaaaaaaagctttattccatttttttggataaagaggttaga
ggcattaacgcaatccagacaattgcaagagtaaatcgtaagacaaaatataaaaacgat
tgtaagatttttgatttttcttatgataacgtcaatgtccaaaacataaaagatgctttt
gaacatttttctgatatggtagtaagtgattttgaccctttcagtgatagaaatattttg
gaaattttactggatgagctaagaaaatcaggttcttataccaagttttataaactgtac
atggaaatttacaatgacaaagatagaacagataatcctgcaagttattttgacctggaa
accagtattgaaaaatacataaaagccaaccccaagcatactgccgatacaaaagcaaaa
gcatcacaatattttaccattctcaaccgtattgaatatgtaataaagcttgataaaaaa
ttcagtgaaaccgtttttttaaaattctgggaattttttaatacaatatacaacaggcta
aacccaaaaaagaatgaaaaagattcaatagaagtctattttgatgataaaattggcata
gtagaggtagaagcacagaagcctaaaaaaaagagaaagaagaaaaccaaagtagcaaca
ggggatataggtggcggtggtcaacagcttgatatattagaaattataaaagcacgaaat
aaaaaagaggaaaaaataggcgaactgattaaagattttgaaaagaagattgaggctttt
tttaaatatgtcgaagattcaaaagaaggaaaaagactgatagtaaaaatcaattctcac
attccagaggaagaaattaaagaagacttcgcaaagatttacaggcgatacaaagcattc
aataaaaaaaaagtaggagactactttttcaaggaaactaaagatttggttgagaaactg
tgtgatgattttgaaattagggtgcagggtaattga

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