Desulfonema limicola: dnl_47620
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Entry
dnl_47620 CDS
T07101
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
dli
Desulfonema limicola
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dli03016
]
dnl_47620 (truA)
Enzymes [BR:
dli01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
dnl_47620 (truA)
Transfer RNA biogenesis [BR:
dli03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
dnl_47620 (truA)
Prokaryotic type
dnl_47620 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Asp23
Motif
Other DBs
NCBI-ProteinID:
QTA82387
UniProt:
A0A975BBJ8
LinkDB
All DBs
Position
complement(5110372..5111115)
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AA seq
247 aa
AA seq
DB search
MKNFKLTIEYDGTAYHGWQIQKKARTIQQEIQQALELMTRQKIVLNGSGRTDAGVHAMAQ
TANFKCTTDLSAHVFQKGLNSLLDDDIVILDCQEVPENFHARFDAKAKTYKYRILNRDLP
SAIDRNYVWFIRSPLNIENMNQAAKHIIGTHDFKSFEGTGSPRIHTIRSITKAEFTIQDN
GFLSFHIQGNGFLRYMVRNIVGTLADAGLEKISPDEFRQVLLSKNRNNAGITAPAQGLFL
MCVDYES
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaatttcaaacttaccatagaatatgacggaactgcataccacggctggcagatc
cagaaaaaagcaagaacaatacagcaggagattcagcaagccctggaactcatgaccagg
cagaaaatcgtgttaaacggttctggaagaacagatgccggggttcatgcaatggcacaa
acagcaaactttaaatgcaccactgatctcagtgcccatgttttccaaaaaggattaaac
agcctgttagatgatgatattgtaatcctagactgccaggaggtgcctgaaaactttcat
gcccgctttgatgcaaaagccaagacatataaataccggatacttaatcgtgatctgccg
tctgccattgaccgtaattatgtatggtttataaggtctcctttgaatattgagaatatg
aatcaggctgcaaaacatattatcggcacccatgatttcaaatcttttgaaggaacagga
agtccgaggatacacacaatccgttctattacaaaagctgaatttacaattcaggataac
ggctttttaagttttcatatccagggaaacggttttctgcgctatatggtaagaaatatt
gtgggtacccttgcagatgcaggcttggaaaagatcagtcctgatgaattcaggcaggta
cttttatcaaaaaacaggaataatgcaggaataacagccccggcccaggggctttttttg
atgtgtgtggattatgagtcttaa
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