Desulfonema limicola: dnl_47990
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Entry
dnl_47990 CDS
T07101
Symbol
topA
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dli
Desulfonema limicola
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dli03032
]
dnl_47990 (topA)
03400 DNA repair and recombination proteins [BR:
dli03400
]
dnl_47990 (topA)
Enzymes [BR:
dli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
dnl_47990 (topA)
DNA replication proteins [BR:
dli03032
]
Prokaryotic type
DNA Topoisomerases
dnl_47990 (topA)
DNA repair and recombination proteins [BR:
dli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
dnl_47990 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QTA82424
UniProt:
A0A975GIJ5
LinkDB
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Position
complement(5160310..5162652)
Genome browser
AA seq
780 aa
AA seq
DB search
MSKPLVVVESPTKVKTIKKYLGKDYNVAATVGHIKDLPSKELGIDVEKEFKPKYRNIPGK
QKVISTLKKEAGDADDIYLAPDPDREGEAIAWHTAEILKKKDRRFHRVLFHELTKNGIKE
AMSHPEELNAQKYEAQKARRILDRLVGYQISPLLWRKVKNGLSAGRVQSVAVRIICERER
AIQAFIPEEYWSITAYLKADAPPPFTAKLSKIKGQKASIPDKQTSDNILADLGENRIIVD
KVIKKTTKRNPQPPFTTSKLQQEAIRKLRFSAKKTMTVAQQLYEGIDLESGDPVGLITYM
RTDSTRIANEAAIEALELIQSQFGKDYVIDKPRFFKNTKKVQDAHEAIRPTSVFNTPEQV
KPYLSKDQHDLYSLIWKRFVASQMQQALINNNSISINVLDYQFSATGSTIKFPGFMVLYL
SADEAAKEEKEKTTLPELKEGEELILEKYEPRQHFTQPPPRFSEASLVKELEENGIGRPS
TYAAILSTIQGKGYVDRAKGYFVPSELGFIVNDLVVQSFPDILDVEFTARMEDDLDRVES
GEIKAISILNRFYEPFQKELDAAVEGMLSMKGVGLETDILCPQCSKSVHVKVGKNGHFLA
CSGYPECNFSRDYIRDEKGKIQIIEPDPEDAVDKKCEKCGKPMVVKRGKYGTFLACSGYP
ECKNTQSVNTGNGGQSTGVKCCEPGCDGDLVERRSKRGKTFYGCSRFPECTFAIWDKPVN
KPCPQCNAPFMVEKTTKKQGTILKCNDKSCGYKESVEEGVEEDSGESGGEKVSDESGKIS
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaaacctcttgttgttgtcgaatcacctactaaggttaaaactataaaaaaatat
cttggaaaagattataatgtagctgccacagtcggccatataaaagatctgccttcaaag
gaacttggtattgatgttgaaaaagagtttaaaccgaaatacagaaatattccaggaaaa
caaaaggttatttcaacattaaaaaaagaggccggagatgcagatgatatttacctggct
cctgaccctgaccgtgaaggggaagctattgcatggcacacagctgagattttaaaaaaa
aaggatcgcagatttcaccgtgtcctgtttcatgagctgaccaaaaacgggattaaagag
gctatgtcccatcctgaagaattgaatgcccaaaaatatgaagctcaaaaagcccgaaga
atacttgacagacttgtggggtatcaaatttcccccctgctgtggagaaaggtaaaaaac
ggtttaagtgccggaagggttcaatctgttgcagtacgaattatctgtgaacgggaaagg
gcaatacaggcatttattcctgaagaatactggtctataacagcttatctaaaagcagat
gcaccgcctccttttacagcaaagctttctaaaataaaaggtcaaaaagccagtattcct
gataagcagacatctgataatattttggcagatcttggggaaaacaggattattgttgac
aaggtaataaaaaaaactacaaagcgcaatccccagcctccttttaccacaagtaaactt
cagcaggaagccataagaaagctcaggttttctgcaaaaaaaacaatgactgtggcacag
cagctttacgaaggaatagacctggaatcaggcgatcctgttggtttgattacatatatg
agaacagattcaacaagaattgcaaatgaagcagcaatagaagcacttgaattaatccag
tctcaatttggcaaagactatgtgattgataaaccgcggttttttaaaaataccaaaaag
gttcaggatgcccatgaagctatccgccccacatcagtatttaacaccccagaacaggtc
aaaccctatctttccaaagatcagcatgatctttattctcttatatggaaacgttttgta
gcatcccagatgcagcaggctctgattaataataattctatttccataaatgtcttggat
tatcaattttctgcaactggttcaaccattaaatttccaggttttatggttctttatctt
tctgctgatgaagcagctaaagaagaaaaagagaaaacaacacttcctgaattaaaagaa
ggtgaagaacttatactggaaaaatatgaacccaggcagcattttacccagcctcctcca
agattttcagaagcatcactggttaaggaactggaggaaaacggtattggccgtccaagc
acctatgcggccattctgtcaaccattcagggaaaaggttatgttgacagggctaaagga
tattttgtgccaagtgagctgggatttattgtgaatgacctggtagtgcaaagttttcct
gatattcttgatgttgaatttacagccaggatggaagacgatctggacagggtggaaagc
ggtgaaataaaagcaataagcatactcaaccgtttttatgaaccttttcaaaaagaactg
gatgctgctgttgaaggaatgctcagtatgaaaggtgtagggctggaaactgatatttta
tgcccccagtgcagcaagtccgttcatgtcaaggtaggtaaaaacggtcatttcctggct
tgcagcggttatcctgaatgtaatttttcaagagattatataagggatgaaaaaggaaaa
atccagattattgagcctgatcctgaagatgcagttgataagaaatgtgaaaaatgcggc
aagcctatggttgttaaacgaggaaagtacggcacattcctggcttgcagcggttatcct
gaatgtaaaaacacccagtcggtaaatactggaaatggaggacagtcaacaggtgttaaa
tgttgtgaacctggctgtgatggtgatttggttgaacgccgttctaaacgcggaaaaacc
ttttatggatgcagccgttttcctgaatgcacttttgccatatgggataaacctgttaat
aaaccctgcccccagtgcaatgcaccatttatggttgaaaaaacaactaaaaaacaagga
acaatacttaaatgtaatgataaatcatgcggatataaagaatctgttgaagagggtgtt
gaagaagattctggagaatctggcggtgaaaaagttagtgatgagtcaggaaagatttcc
tga
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