Desulfonema limicola: dnl_50560
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Entry
dnl_50560 CDS
T07101
Symbol
rnc
Name
(GenBank) Ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
dli
Desulfonema limicola
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dli03019
]
dnl_50560 (rnc)
03009 Ribosome biogenesis [BR:
dli03009
]
dnl_50560 (rnc)
03036 Chromosome and associated proteins [BR:
dli03036
]
dnl_50560 (rnc)
Enzymes [BR:
dli01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
dnl_50560 (rnc)
Messenger RNA biogenesis [BR:
dli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
dnl_50560 (rnc)
Ribosome biogenesis [BR:
dli03009
]
Eukaryotic type
90S particles
RNase
dnl_50560 (rnc)
Prokaryotic type
rRNA processing factors
dnl_50560 (rnc)
Chromosome and associated proteins [BR:
dli03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
dnl_50560 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
PHD_like
Motif
Other DBs
NCBI-ProteinID:
QTA82675
UniProt:
A0A975BCI0
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All DBs
Position
5443177..5443863
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AA seq
228 aa
AA seq
DB search
MQLSKLEKKLSYIFKDKTLIQEACRHSSFVNEHPDKLVRDNERLEFLGDAVLNLVIGHLL
MKQYPDIPEGDLSRMRANLVNEIQLAKIARFLGIGKYLELGKGEEQTKGREKNSILADAF
EAVIAAIYLDTGFNSAFDFIDSQFSKLIPKMSVPALNYDYKSKLQEVIQVNHKVMPGYKI
ENESGPDHDKTFVVSINFDNIKVTGTGKSKKTAEQDAAKKALESLNII
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgcagctttcaaaactggaaaaaaaactttcatatatttttaaagataagacacttata
caggaagcctgccgccacagttcttttgtgaacgaacatcctgacaagcttgtcagggat
aatgagcgccttgaatttttaggagatgctgttttaaatcttgttataggtcatcttctt
atgaaacaatatcctgatatccctgaaggagacctgtcaagaatgcgcgccaacctggta
aatgagatccagctcgcaaaaattgcaagatttcttggtattggaaaatatctggaattg
ggcaaaggagaggaacagacaaaagggcgtgaaaaaaattcaattttagctgatgctttt
gaagctgtaatagctgcaatataccttgacacaggttttaattcagcatttgattttatt
gacagtcagttttcaaaattaatccccaaaatgtcagttcctgcattaaactatgattat
aaaagcaagcttcaggaggttatccaggtaaatcataaggtaatgcctggttataagatt
gaaaatgaaagcgggcctgaccatgataaaacctttgttgtaagtataaattttgacaat
ataaaggttacaggaacagggaaaagcaaaaaaacagcagaacaggatgctgcgaaaaag
gctcttgaatcattgaatattatataa
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