Desulfonema limicola: dnl_55810
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Entry
dnl_55810 CDS
T07101
Symbol
dnaX
Name
(GenBank) DNA polymerase III, subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
dli
Desulfonema limicola
Pathway
dli03030
DNA replication
dli03430
Mismatch repair
dli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
dnl_55810 (dnaX)
03430 Mismatch repair
dnl_55810 (dnaX)
03440 Homologous recombination
dnl_55810 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dli03032
]
dnl_55810 (dnaX)
03400 DNA repair and recombination proteins [BR:
dli03400
]
dnl_55810 (dnaX)
Enzymes [BR:
dli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
dnl_55810 (dnaX)
DNA replication proteins [BR:
dli03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
dnl_55810 (dnaX)
DNA repair and recombination proteins [BR:
dli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
dnl_55810 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
RuvB_N
AAA_5
AAA_30
DNA_pol3_delta_C
AAA_22
TIP49
Rad17
RCF1-5-like_lid
AAA_19
AAA_18
Mg_chelatase
AAA_16
nSTAND3
AAA_14
DEAD
TsaE
PIF1
AAA_2
AAA_28
AAA_7
AAA_lid_RFC1
Sigma54_activat
DUF815
AAA_assoc_2
AAA_24
RNA_helicase
ABC_tran
Crb2-like_BRCT-like
Herpes_U47
bpMoxR
Cytidylate_kin
AAA_11
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
QTA83185
UniProt:
A0A975BDH0
LinkDB
All DBs
Position
complement(5975285..5976955)
Genome browser
AA seq
556 aa
AA seq
DB search
MSYLVLARKYRPQTFEDVVKQEHVTRTLSNAIVSGRVAHAILFSGPRGTGKTTVARILAK
AMNCKQGPTPLPCNICRSCKEITAGSSPDVFEIDGASNNGVDHIRELRENIRYMPAYSPY
KIYIIDEVHMLSTQAFNALLKTLEEPPSHIMFLFATTEPHKIPITILSRCQRHDLRRIDM
ESITGHMALLCNKEGVDIQKESLALIARESGGSMRDALSLLDQVITCSQDNMTHEHILDI
LGVIDRKFLFDISAAVLQGDMGRILELIADIYDHGHNLKELYTSLLEHFRNLMVAKMGNQ
AAGLIDLPSHEIRLMAEQVKNVSGLFLNQILDALFKEETIIKFSTQPRLALEMAFIRIFQ
IKPALPIEQLIEKIDNLSKGVSLEFVSAFPAPMPGQSMLREGKSYETNRCELSEPPLENK
PESAIIKFDQNDSDDEIWEKLKKLITSESSSLGSYLNKADFKRLNNDRLEIQANDSSFNF
KQISKKEDLIKDICEKFFGKKITLLIIPEKTGNNKKIETKTQAEQKKQDALNHPITQAAL
EIFNGKLVEVKILQEV
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcttgtgcttgcccgtaaatacaggccccagacatttgaagatgttgtgaaa
caggaacatgtaacccgtaccttatctaatgccattgtatcaggcagggttgcccatgca
atcttgttttcaggcccaagggggacaggaaaaacaactgttgccagaattcttgcaaaa
gcaatgaattgcaaacaggggccgacccctttaccctgcaatatatgcagatcatgtaaa
gaaattacagcaggcagttcacctgatgtttttgaaattgacggagcatcaaacaatggc
gtggatcatattcgggagctgcgtgaaaatatccgctacatgcctgcatacagtccttac
aagatatatataatagatgaagtacacatgctgagtacccaggcatttaatgcactttta
aaaacccttgaagaacccccttctcatataatgtttctgtttgcaacaactgagcctcac
aaaatacccataaccattctttcaagatgccagcgccatgatctcaggagaattgatatg
gaatcaataacaggacatatggctttattgtgcaataaggaaggtgtggatatacaaaag
gaaagcctggcattgattgcaagggaatcaggaggcagcatgcgggatgccttgagtctg
ctggatcaggtcataacatgttcccaggataatatgacccatgaacatatacttgatata
ttaggtgtaattgacaggaagtttctttttgatatttcagcagcagtattacagggagat
atgggaagaatccttgagcttattgctgatatttatgatcatggtcataatttaaaggaa
ttatatacatctcttttggagcatttcagaaatctcatggtagctaaaatgggaaaccag
gcagccggcttgatagaccttccttcccatgagatcaggcttatggcagagcaggtaaaa
aatgtgtcagggctttttttaaaccagatacttgatgctctttttaaagaagaaactata
ataaaattttccacccagccaagactggcactggaaatggcatttataagaatatttcag
atcaaaccagccctgcctattgagcagcttattgaaaaaatagataatttaagcaaaggg
gtaagtcttgaatttgtttcagcgtttcctgctccaatgcctggacaatctatgctcagg
gagggaaaatcatatgaaacaaatagatgtgaactttctgagcctccacttgaaaataaa
ccagaatctgctattattaaatttgatcaaaatgattctgatgatgaaatatgggaaaaa
cttaaaaaattgattaccagtgaatcttcatcactgggatcgtatctcaataaagcagat
tttaaaaggctcaataatgacaggctggagatacaggcaaatgacagcagttttaatttt
aaacagatttcaaaaaaagaagacctgataaaagatatttgtgaaaaattttttggcaaa
aaaataacattgcttattatccctgaaaaaacagggaataataagaaaattgaaacaaaa
acacaggctgaacaaaaaaaacaggatgctttgaatcacccgattacacaggcagcactg
gaaatttttaacggcaagcttgtggaagttaaaattttacaggaggtatga
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