Desulfonema limicola: dnl_55920
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Entry
dnl_55920 CDS
T07101
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dli
Desulfonema limicola
Pathway
dli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
dnl_55920 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dli03019
]
dnl_55920 (groL)
03110 Chaperones and folding catalysts [BR:
dli03110
]
dnl_55920 (groL)
03029 Mitochondrial biogenesis [BR:
dli03029
]
dnl_55920 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dli04147
]
dnl_55920 (groL)
Enzymes [BR:
dli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
dnl_55920 (groL)
Messenger RNA biogenesis [BR:
dli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
dnl_55920 (groL)
Chaperones and folding catalysts [BR:
dli03110
]
Heat shock proteins
HSP60 / Chaperonin
dnl_55920 (groL)
Mitochondrial biogenesis [BR:
dli03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
dnl_55920 (groL)
Exosome [BR:
dli04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
dnl_55920 (groL)
Exosomal proteins of other body fluids (saliva and urine)
dnl_55920 (groL)
Exosomal proteins of breast cancer cells
dnl_55920 (groL)
Exosomal proteins of colorectal cancer cells
dnl_55920 (groL)
Exosomal proteins of bladder cancer cells
dnl_55920 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QTA83196
UniProt:
A0A975BD65
LinkDB
All DBs
Position
5983964..5985613
Genome browser
AA seq
549 aa
AA seq
DB search
MAKQIKYDMKAREAMLNGVKTLADAVVVTLGPKGRNVVIDKSWGSPTVTKDGVTVAKEIE
LEDKFENMGAQMVKEVASKTSDMAGDGTTTATVLARSIYEEGQKLVAAGNNPMAIKRGID
KAVEIAVKELHAMSKPTKDQREIAQVGTISANNDETIGNIIAEAMNKVGKEGVITVEEAK
SMETTLDVVEGMQFDRGYLSPYFVTDAEKMVASLDDPYILINEKKISSMKDLLPILEQVA
KMGKPLMIIAEDVDGEALATLVVNKLRGTLHVAAVKAPGFGDRRKAMLEDIAILTGGQVV
SEDIGIKLENMNLNDLGRAKRISIDKDNTTIVDGAGERTALEGRVKQIRAQIEETTSDYD
REKLQERLAKLIGGVAVINVGAATETEMKEKKARVEDALNATRAAVEEGIVPGGGVALVR
CLKALESVEVTDEQKLGVKVVMRAMEEPLRQIANNAGMEGSVVIDKVKSSEGAVGYNAAT
NVYEDLIEAGVIDPTKVTRFALQNAGSVASLMLTTEAMIADKPEPKQDSGMPGGGMGGMG
GMGGMGGMM
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacagattaaatatgatatgaaagcccgcgaagctatgctcaacggggtaaaa
acccttgcagatgcagtagttgttacacttggacccaaaggaagaaatgttgttattgac
aaatcctggggttctcctactgtaacaaaagacggtgttactgttgcaaaggaaattgaa
cttgaagataaattcgagaacatgggcgcacagatggttaaagaagttgccagcaaaaca
agtgatatggctggtgacggtacaaccacagcaacagttcttgcaagatctatttatgaa
gaaggacagaaacttgttgcagcaggcaataatccaatggcaatcaaacgcggcatagac
aaggctgttgagattgcagttaaagaacttcatgcaatgagcaaacctaccaaagatcag
cgtgaaattgcacaggttggtacaatctctgccaataatgatgaaaccataggaaacatc
attgccgaggcaatgaacaaggttggaaaagaaggcgttattactgttgaagaagccaaa
agcatggaaacaacacttgatgttgttgaaggtatgcagtttgaccgcggttatctttct
ccttattttgtaacagatgctgaaaaaatggttgcatcccttgacgatccttatatcctg
attaacgagaaaaaaatcagcagcatgaaagaccttctgcctattcttgagcaggttgca
aaaatgggcaaacctcttatgataattgcagaagatgttgacggtgaagccctggcaaca
ctggttgtcaataagctgagaggtactttgcatgtagcagcagttaaagctcctggtttt
ggcgacagaagaaaagccatgctggaagatattgccattcttacaggaggacaggttgtt
tccgaagatattggaatcaaactggaaaacatgaacctgaacgatcttggcagggcaaaa
cgtatttccattgataaagataataccacaattgttgacggagcaggtgagcgcactgca
ctggaaggccgtgtaaaacagatccgtgcccagattgaagaaaccacatcagattatgac
cgtgaaaaacttcaggaacgtctggcaaaacttatcggcggtgttgctgtaattaatgtc
ggtgctgctactgaaacagagatgaaagagaaaaaagcccgtgttgaagatgctcttaac
gctacccgtgctgctgttgaagaaggtattgttcctggaggcggtgttgcacttgtacgc
tgtctgaaagctctggaaagtgttgaagtaactgacgaacagaaactgggtgtcaaggtt
gtaatgcgtgcaatggaagaacccctgcgccagattgccaataatgcaggtatggaaggt
tctgttgttattgacaaggttaaaagcagcgaaggtgccgtaggctacaatgcagcaacc
aacgtatatgaagaccttattgaagctggtgttattgatcctaccaaagttacacgtttt
gcacttcagaatgcaggcagtgttgcttcccttatgctgactactgaagccatgattgct
gacaaacctgaaccaaaacaggattcaggaatgcctggcggcggtatgggcggcatgggc
ggtatgggcggcatgggcggcatgatgtaa
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