Desulfonema limicola: dnl_57730
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Entry
dnl_57730 CDS
T07101
Name
(GenBank) PAS modulated sigma54-dependent transcriptional regulator, Fis family
KO
K06714
arginine utilization regulatory protein
Organism
dli
Desulfonema limicola
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dli03000
]
dnl_57730
Transcription factors [BR:
dli03000
]
Prokaryotic type
Helix-turn-helix
Other families
dnl_57730
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
PAS_9
AAA
AAA_16
Bac_DnaA
GAF_2
AAA_3
DUF815
AAA_2
Motif
Other DBs
NCBI-ProteinID:
QTA83369
UniProt:
A0A975GJB0
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Position
complement(6156380..6157939)
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AA seq
519 aa
AA seq
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MPQTIIQNIDRYCLKGVDFSSIEFMELLCCLDLGVLMTDHKGVLIFYNHVQATIDRMDPA
QVLGKPITQVYEYDNDSSTCMRVLKHGKPIINYALSYRSENANVGNTIHSVFPLFINGKI
FGTICFVKDYNILERSIPAFLSPGNNSRFAQGTRYTFASIIGSDPVFVDSVKAAKIAGNS
PSPVMLYGETGTGKELFAQAIHNFYYGNEGRYVDINCAAIPENLIEGLLFGTVKGAYTGA
VDRAGLFEQANQGTIFLDEINSMPLALQGKLLRAIQEKKVRRVGSLNSTSLEIKIISSLN
QSPKSLIKSGAFRMDLFYRLGVIFIKLPALRDRRLDIEELGRHFLQKYNTQLGKSIENID
PELINFFWDYPWPGNIRELEHVIESAVNLAGNNETRLKLKHCYFANILEQEDIQESRPRI
LSLNPHPDNPSDNTEFFPKSNQSLPFIDRRNSYPETNSDLNLARAASSLEKDMILNALER
SNGNMAGAAKLLGISRQLLGYKIAKQGLRPLLTALKHNK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgccccaaacaataatccaaaatattgaccggtattgcctgaaaggagttgattttagt
tccattgaattcatggaactgctctgctgtcttgaccttggggttcttatgacagaccat
aagggtgttcttattttttacaatcatgttcaggccaccatagacaggatggatcctgcc
caggtccttggcaaacccattacccaggtgtatgagtatgataatgattcctctacttgt
atgcgtgtactcaaacatggcaaacccattattaattatgccctgtcctaccggtcggaa
aatgccaacgtgggcaataccatccatagtgttttccccttgtttattaatgggaaaatc
tttggtactatttgttttgtaaaagattacaacatattggaaagaagcatcccggccttt
ctttcccctggcaataacagcaggtttgcccagggaacccgatatacttttgcttccatc
ataggctctgatcctgtatttgttgattctgtcaaggctgccaaaatcgcaggaaattca
ccatcccctgttatgctctacggtgaaaccggaaccggtaaagaactttttgcccaggcc
attcataatttttattacgggaatgagggcaggtatgttgatattaattgtgcagctatt
cctgaaaaccttattgaaggtctgctgtttggaactgtaaaaggtgcctataccggtgct
gtggatcgtgctggcctgtttgaacaggcaaaccagggaactatcttcctggatgaaata
aattccatgcccctggcacttcaaggcaagctgctcagggctatacaggaaaaaaaggta
agacgggttggctcgttgaacagtaccagcctggaaattaaaataatttcttccttgaat
caatcgcccaagtcattaatcaagtccggtgcctttcgtatggatcttttttaccggctg
ggagttatcttcattaaactgccggcactgcgggacaggcggctggacattgaagaactg
ggacggcattttctccagaaatacaatacccaattgggaaaatccattgaaaacattgac
ccggaactcattaactttttctgggactatccctggcccggcaatatcagggagcttgag
catgtgattgaaagtgctgtaaaccttgccggaaacaatgaaaccaggcttaaactcaag
cactgctattttgccaatatcctggagcaggaagatattcaggaatcaagaccccgtatc
ttatctttgaatccgcatcctgacaatccatctgataacacggagttttttcctaaatca
aaccaaagcctgccttttatagacaggagaaattcttaccctgaaacaaattcagactta
aaccttgcccgtgctgcttcaagtcttgagaaagacatgatcctcaatgccttggagcgt
tccaatggaaatatggccggggcagcaaaattattaggcatatcccgccagcttctgggc
tataaaattgccaaacaaggtctccgtcctttgctgacagcactaaagcataataaataa
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