Desulfonema limicola: dnl_57790
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Entry
dnl_57790 CDS
T07101
Name
(GenBank) AMP-binding enzyme
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dli
Desulfonema limicola
Pathway
dli00061
Fatty acid biosynthesis
dli00071
Fatty acid degradation
dli01100
Metabolic pathways
dli01212
Fatty acid metabolism
dli02024
Quorum sensing
dli04146
Peroxisome
Module
dli_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
dnl_57790
00071 Fatty acid degradation
dnl_57790
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
dnl_57790
09145 Cellular community - prokaryotes
02024 Quorum sensing
dnl_57790
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dli01004
]
dnl_57790
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dli04147
]
dnl_57790
Enzymes [BR:
dli01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
dnl_57790
Lipid biosynthesis proteins [BR:
dli01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
dnl_57790
Exosome [BR:
dli04147
]
Exosomal proteins
Exosomal proteins of breast milk
dnl_57790
Exosomal proteins of breast cancer cells
dnl_57790
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
ODP
Motif
Other DBs
NCBI-ProteinID:
QTA83375
UniProt:
A0A975BDQ9
LinkDB
All DBs
Position
complement(6162491..6164407)
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AA seq
638 aa
AA seq
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MEDREHLLKYTIPQLLYRRSLYSPDKVALREKDFGYWKSYTWKNYYSFVRKTGLGLEKIG
IKKGDKIALIGDNIPEMLFMAIGIQSLGGISAGIYQTSLPDEIAGIIEYLDVTAVFCDNQ
EQVDKLVEIRSRIPGVKKVIYEDARGMRSYKSDKWFMNIKEIYELGDTAHKEDPDHFQSL
VDQGKPDEVCHLCLTSGTTGLPKGAMMTHLNYVNMGVQITKVDPLEESDEYLSFLPFAWI
GEQMNSFGVAMATGIAINFPESVETVMDDLKEIGPHFMFGAPRIYETIRSQIWLKIDESY
WFNRLLYNYFIKTGEKAAQYRMTGRKMPAGLAFKSWLGKQMMFRPLVNQIGLLRLRRAYT
GGAALGPELFTFYQAIGVNLKQIYGQTEITGIAYMHRDGDIRSNTVGKPLPGTECKISDS
GEILSRSASVSPGYYKLPDKTEELLENGWLHSGDAGYLDENGHLIVIDRVSDVMYNNNGE
MFSPMFLENRLKFSPYIKEAVIFGNNEDYVSTLVNIDPVVVGKWAEDRGVSFSTFMDLSA
KPEVAELIQDQIALINAGAEQEHFKIRRFAILYKLLDMDDGELTKTGKIRRKFVLEKYQE
LYDALYDESIKDKKVKACFQYQDGQTAIVETQICFYTM
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggaagaccgtgaacatttgctgaaatacactattcctcaattactctatcgaagatcc
ctttattctcccgacaaggtggcattgcgtgaaaaggattttggatactggaaatcctat
acatggaagaattattattcctttgtccgtaaaaccgggctgggtcttgaaaaaatcggg
ataaaaaaaggggataagatcgcacttataggagacaatatccctgaaatgctttttatg
gctattggaatccaaagcctgggcgggatttcagcagggatatatcagaccagtcttcct
gatgaaattgcagggatcattgaataccttgatgttacagcagtgttttgtgataaccag
gagcaggttgacaagcttgtggagattcgttccagaattcccggtgtaaaaaaagtaatt
tatgaagatgcccgaggtatgcggagttataaatcagataagtggttcatgaatataaag
gagatttatgaattgggagatactgcccacaaggaggatccagaccattttcaatccctg
gttgaccagggaaaacctgatgaggtctgccatctctgcctgacttccgggacaacaggg
ctgcctaagggtgccatgatgacccatctcaattatgtaaatatgggggttcagataaca
aaggtggatcctcttgaggaaagtgatgaatatctctcttttctcccttttgcctggata
ggggaacagatgaactcttttggtgtagctatggctactggcattgctattaattttcct
gaatcagttgaaactgttatggatgatctaaaagaaataggccctcatttcatgtttggt
gctccccggatctatgaaaccatacgttctcagatatggctcaagattgatgaatcatac
tggtttaacaggcttttgtataattattttataaaaacaggggaaaaagctgcacaatat
agaatgacaggcaggaaaatgcctgccggccttgcttttaaatcatggcttggaaagcag
atgatgtttcgccctcttgtaaatcaaataggccttctccgcctgagacgggcatatacc
ggaggtgcggcactggggcctgaattatttaccttttatcaagctattggcgtaaatctt
aaacagatttacggacaaacagagattaccggaattgcctatatgcacagggacggggat
attcgatccaatacagtcggcaagcccctgccgggaactgaatgtaagatttctgattca
ggagagattctttccaggtctgcatctgtttccccgggttattataaacttcctgataaa
accgaagaattgctggaaaacggatggcttcattcaggtgatgcaggttatcttgatgaa
aacgggcatttaattgtaatagaccgggtttctgatgttatgtacaataataatggagaa
atgtttagccccatgtttcttgaaaaccgccttaaattcagtccttatatcaaagaagct
gttatatttgggaataatgaagattatgtttctactcttgtaaatattgatcctgttgta
gtgggaaaatgggcagaagaccgcggtgtctcattttcaacttttatggatctttcagca
aagcctgaagtagcagaactgattcaagaccagattgccctgattaatgccggtgccgaa
caagaacattttaagatcagacggtttgccatcttatataaacttctggatatggatgac
ggggaattaactaaaaccggaaagatcagaagaaaatttgtactggaaaaataccaggag
ctttatgatgcactttatgatgaatcaataaaagacaaaaaagtcaaagcctgctttcag
tatcaggacggtcaaactgcaatagtggagacacagatttgtttttatacaatgtaa
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