Desulfonema limicola: dnl_60890
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Entry
dnl_60890 CDS
T07101
Symbol
dcm4
Name
(GenBank) DNA-cytosine methyltransferase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
dli
Desulfonema limicola
Pathway
dli00270
Cysteine and methionine metabolism
dli01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dli00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
dnl_60890 (dcm4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dli03000
]
dnl_60890 (dcm4)
03032 DNA replication proteins [BR:
dli03032
]
dnl_60890 (dcm4)
03036 Chromosome and associated proteins [BR:
dli03036
]
dnl_60890 (dcm4)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
dli02048
]
dnl_60890 (dcm4)
Enzymes [BR:
dli01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
dnl_60890 (dcm4)
Transcription factors [BR:
dli03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
dnl_60890 (dcm4)
DNA replication proteins [BR:
dli03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
dnl_60890 (dcm4)
Chromosome and associated proteins [BR:
dli03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
dnl_60890 (dcm4)
Prokaryotic defense system [BR:
dli02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
dnl_60890 (dcm4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
QTA83675
UniProt:
A0A975BE90
LinkDB
All DBs
Position
6506631..6507575
Genome browser
AA seq
314 aa
AA seq
DB search
MKAIDLFSGIGGLSLGFQNAGFKIISAFDNWQAAVDIYKANFEHDVLQTDLSRISNYQPI
KNLKPDVIIGGPPCQDFSCAGKRNEKLGRADLTITFANIVSNVKPILFVMENVERITKSY
TLQKAIKIFKKAGYGITSKVLNASLCGVPQIRKRFFLIGFLNGEDNILDYYLTKNLSKKP
MSVYDYLGDNLGIEYYYRHPWSYARRAIFSIHEPSPTIRGVNRPIPKTYKTHSGDATDII
KNVRPLTTIERSYIQTFPKSFKLNGTKTDLEQMIGNAVPVKLAEYVAKAILKYYSDYKSD
EIKNKSYQLQLKFN
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaatagatttattttcaggtatcggaggtttatcgttaggttttcaaaatgct
ggttttaaaataatatctgcatttgataattggcaagccgctgttgacatatataaagct
aatttcgaacatgatgttttgcagactgatctttcaagaatctcgaattatcaacccatt
aaaaatttaaaacctgacgtaatcatcggaggcccgccttgtcaggatttttcatgtgca
ggaaaaaggaatgaaaaactaggcagagcagatttaacaattacatttgcaaatattgtt
tcaaatgtaaaaccaatattatttgttatggaaaatgttgaaagaataacaaagagttat
actttgcaaaaagcaataaaaatattcaaaaaagctggttacggtataacatcaaaggtt
ttaaatgcaagtttatgtggtgttcctcaaataagaaaaagattttttttaattggtttc
ctaaatggtgaagataatattttagattattatttaacgaaaaatttatcaaaaaagcca
atgtcagtttatgattatttgggtgataatcttggtattgaatattattacaggcatcct
tggagttatgctagaagagccatctttagtatacatgaacccagtccaactattagagga
gtaaatcgacctatacctaaaacttataaaactcactctggggatgcaactgatataata
aaaaatgttagacctttaactacaattgaacgcagttatattcaaacatttccaaaaagt
tttaaattaaatggaactaaaacagatttggagcaaatgattggaaatgcagttccagtt
aagcttgctgaatatgttgcaaaagcaatattaaaatattattcagattataaaagtgac
gaaataaaaaataaatcgtatcagcttcaacttaagtttaattaa
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