KEGG   Desulfofustis limnaeus: DPPLL_00930
Entry
DPPLL_00930       CDS       T09067                                 
Symbol
yhaM
Name
(GenBank) HD family phosphohydrolase
  KO
K03698  3'-5' exoribonuclease [EC:3.1.-.-]
Organism
dlm  Desulfofustis limnaeus
Brite
KEGG Orthology (KO) [BR:dlm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dlm03019]
    DPPLL_00930 (yhaM)
Messenger RNA biogenesis [BR:dlm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     DPPLL_00930 (yhaM)
SSDB
Motif
Pfam: HD tRNA_anti-codon TraI_2 HDOD Serine_rich Cas3_HD
Other DBs
NCBI-ProteinID: BDD85728
UniProt: A0ABN6LYK8
LinkDB
Position
96482..97510
AA seq 342 aa
MEKKRFVEELVDGEHLDDLFLVKSSRLAETRAGKPFLMLTIGDRSGELTGPAWDNAEALE
TVCTVGSVVRIRGQIQTYNNKLQIQVKDAEAVDDSLWRPEDFVTASSRSQREMRDELDRL
IGTVRTPPLRKLLKNLFNTAAIAASFQTAPAAKGIHHAYLGGLFEHSLSMAKVAGLLADH
YPGIDRDLLIAGALLHDIGKTEELLNDTGAIDYTEVGRLKGHLVIGCELVGRAARAIDGF
PEDLLTHLQHLVLSHHGRLEFGSPVVPMTPEALLLSFVDDLDAKMNLVEQLRRKVKGETA
QWSDYQRSLERFLLLRPLGGGGERHGATEEKTEIPSRQKSLF
NT seq 1029 nt   +upstreamnt  +downstreamnt
atggaaaagaagcgatttgtcgaagagctggtcgacggtgaacacctggatgatcttttt
ctggtaaagagttcccgtctggcggagacccgggccggcaagccgttcctgatgctgacc
atcggggatcggagcggtgagctgaccgggcctgcgtgggacaatgccgaggctctggaa
acggtctgcacggtcggttcggtggtgcggatacggggacagattcaaacctacaacaac
aagctgcagatacaggttaaggatgcggaagcggtagacgattcgctgtggcgcccggaa
gacttcgtcacggcgagcagccgtagccagcgagagatgcgcgacgaactcgatcgtttg
atcgggaccgtgcgcaccccgccgttgcgcaagctgttgaaaaaccttttcaataccgca
gcgatcgccgcatcgtttcagacagcaccggcggcaaaaggtatccatcacgcctatctc
ggggggctcttcgaacactctttatccatggccaaggtggcagggctgctggctgatcat
tatcctggtattgatcgggatctcctgatagcgggggccttgctccacgatatcggcaag
accgaggaattgttgaacgataccggggcaatcgactataccgaggtggggcgtttgaag
gggcatctggtgatcgggtgcgaattggtcggtcgcgccgcccgagcaatcgacggtttt
cccgaagatttgttgacccacctgcaacacctggtgctcagccatcacggtcgactcgaa
ttcggttcgccggtggtgccgatgaccccagaggcgctgctgctcagttttgtcgatgac
ctggacgccaaaatgaatctggtggagcaactgcgccgcaaagtgaagggggaaacggcg
cagtggagcgactatcagcgcagcttggagcgtttcctgctgctgcgcccgcttggcggt
ggaggtgagcgccatggggcaacagaagagaaaacggagattcccagcaggcaaaaaagc
ctgttttga

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