Desulfofustis limnaeus: DPPLL_00930
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Entry
DPPLL_00930 CDS
T09067
Symbol
yhaM
Name
(GenBank) HD family phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
dlm
Desulfofustis limnaeus
Brite
KEGG Orthology (KO) [BR:
dlm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dlm03019
]
DPPLL_00930 (yhaM)
Messenger RNA biogenesis [BR:
dlm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DPPLL_00930 (yhaM)
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Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
HDOD
Serine_rich
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
BDD85728
UniProt:
A0ABN6LYK8
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Position
96482..97510
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AA seq
342 aa
AA seq
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MEKKRFVEELVDGEHLDDLFLVKSSRLAETRAGKPFLMLTIGDRSGELTGPAWDNAEALE
TVCTVGSVVRIRGQIQTYNNKLQIQVKDAEAVDDSLWRPEDFVTASSRSQREMRDELDRL
IGTVRTPPLRKLLKNLFNTAAIAASFQTAPAAKGIHHAYLGGLFEHSLSMAKVAGLLADH
YPGIDRDLLIAGALLHDIGKTEELLNDTGAIDYTEVGRLKGHLVIGCELVGRAARAIDGF
PEDLLTHLQHLVLSHHGRLEFGSPVVPMTPEALLLSFVDDLDAKMNLVEQLRRKVKGETA
QWSDYQRSLERFLLLRPLGGGGERHGATEEKTEIPSRQKSLF
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaagcgatttgtcgaagagctggtcgacggtgaacacctggatgatcttttt
ctggtaaagagttcccgtctggcggagacccgggccggcaagccgttcctgatgctgacc
atcggggatcggagcggtgagctgaccgggcctgcgtgggacaatgccgaggctctggaa
acggtctgcacggtcggttcggtggtgcggatacggggacagattcaaacctacaacaac
aagctgcagatacaggttaaggatgcggaagcggtagacgattcgctgtggcgcccggaa
gacttcgtcacggcgagcagccgtagccagcgagagatgcgcgacgaactcgatcgtttg
atcgggaccgtgcgcaccccgccgttgcgcaagctgttgaaaaaccttttcaataccgca
gcgatcgccgcatcgtttcagacagcaccggcggcaaaaggtatccatcacgcctatctc
ggggggctcttcgaacactctttatccatggccaaggtggcagggctgctggctgatcat
tatcctggtattgatcgggatctcctgatagcgggggccttgctccacgatatcggcaag
accgaggaattgttgaacgataccggggcaatcgactataccgaggtggggcgtttgaag
gggcatctggtgatcgggtgcgaattggtcggtcgcgccgcccgagcaatcgacggtttt
cccgaagatttgttgacccacctgcaacacctggtgctcagccatcacggtcgactcgaa
ttcggttcgccggtggtgccgatgaccccagaggcgctgctgctcagttttgtcgatgac
ctggacgccaaaatgaatctggtggagcaactgcgccgcaaagtgaagggggaaacggcg
cagtggagcgactatcagcgcagcttggagcgtttcctgctgctgcgcccgcttggcggt
ggaggtgagcgccatggggcaacagaagagaaaacggagattcccagcaggcaaaaaagc
ctgttttga
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