Desulfofustis limnaeus: DPPLL_00940
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Entry
DPPLL_00940 CDS
T09067
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
dlm
Desulfofustis limnaeus
Pathway
dlm03030
DNA replication
dlm03430
Mismatch repair
dlm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dlm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DPPLL_00940 (holB)
03430 Mismatch repair
DPPLL_00940 (holB)
03440 Homologous recombination
DPPLL_00940 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dlm03032
]
DPPLL_00940 (holB)
03400 DNA repair and recombination proteins [BR:
dlm03400
]
DPPLL_00940 (holB)
Enzymes [BR:
dlm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DPPLL_00940 (holB)
DNA replication proteins [BR:
dlm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DPPLL_00940 (holB)
DNA repair and recombination proteins [BR:
dlm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DPPLL_00940 (holB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_delp_C
AAA
Motif
Other DBs
NCBI-ProteinID:
BDD85729
UniProt:
A0ABM7W479
LinkDB
All DBs
Position
97525..98508
Genome browser
AA seq
327 aa
AA seq
DB search
MTEDRLLFPGLQGQEKAKTLLRRVTESRRLAHAYLFRGPDGVGKRLCAYLFGAFLNCLEP
TGNGACGRCLSCRKYLSGNHPDFIVVSPESGTIKIDRIRELCRSLSYPPYESAMRIVVME
DVHLLRTEAANSLLKTLEEPPAQNLLILTAESSRTVLPTILSRCQIIPFYGLNDEQVKQV
LQDKEPVLSEEEVRTLVLMAAGSPGLALRLRREGIVSLWQEVLTVLSGQVDEASRISAVL
CCAERLAELKEHLVVLFDLLQIWVRDGLLAQQQAGVTAAVDGARARLNAIDRARQRLARN
CNRSLVCETLLFDLQATVPGVSFKVHH
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaggatcgattgctctttcccggattgcaggggcaggaaaaggccaagacgttg
ctgcgacgagttactgaatcgcggcggttggcccatgcctatttgttccgcgggcccgac
ggtgtgggaaagcggctctgtgcctatcttttcggagcctttctgaattgccttgagccc
accggcaacggggcctgcggccggtgcctctcatgccgcaaatatctatcgggcaaccat
cccgactttatcgtcgtcagcccggaaagcggtaccataaaaatcgatcgtatccgtgag
ctgtgccgctctttgtcctacccgccctatgaatcggcaatgaggatcgtggtcatggag
gatgtgcatctgctgcgtacggaggctgccaatagtttgctgaaaacccttgaggaacca
cccgctcagaacctgctgattttgacggcggaatcgagccgtacggtcctaccgacgatc
ctctcccgctgccagatcataccgttctatggtctcaacgatgaacaggtgaagcaggtc
ttgcaggacaaggagccggtactgagcgaagaagaggtgcggaccctggtgctcatggcg
gccggaagccccggactggctttacgtttgcgtcgggagggtattgtttcgctgtggcag
gaggtgctgacggtactgagtggccaggtcgatgaagcgagccggatttctgcggtattg
tgctgtgccgagcgtctggcggaattgaaggaacatctggtggtgttgttcgacctgttg
cagatctgggtgcgtgatggtctgttggcccagcagcaggccggtgtgacggcagcggtt
gatggcgcccgggccagattgaacgccatcgaccgggcccggcagcgattggcgaggaat
tgcaaccgctccctggtctgtgagacactgctttttgatttacaggcaacagtgcctgga
gtatcatttaaagttcaccattag
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