Desulfofustis limnaeus: DPPLL_01370
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Entry
DPPLL_01370 CDS
T09067
Symbol
ihfB-1
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
dlm
Desulfofustis limnaeus
Brite
KEGG Orthology (KO) [BR:
dlm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dlm03032
]
DPPLL_01370 (ihfB-1)
03036 Chromosome and associated proteins [BR:
dlm03036
]
DPPLL_01370 (ihfB-1)
03400 DNA repair and recombination proteins [BR:
dlm03400
]
DPPLL_01370 (ihfB-1)
DNA replication proteins [BR:
dlm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DPPLL_01370 (ihfB-1)
Chromosome and associated proteins [BR:
dlm03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
DPPLL_01370 (ihfB-1)
DNA repair and recombination proteins [BR:
dlm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
DPPLL_01370 (ihfB-1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
DUF2267
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
BDD85772
LinkDB
All DBs
Position
complement(145823..146104)
Genome browser
AA seq
93 aa
AA seq
DB search
MNKSELIEALAQDIGVPHREAAAITNTVIDTMTEALARGESIEIRGFGSFVIKHYGSYEG
RNPKTGKKIKVSPKKLPFFKVGKDLREQVNSKR
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatccgaattgatcgaggccttggcgcaggacattggtgtgccgcaccgggaa
gcagccgccatcaccaatacggttatcgacaccatgacagaagcgctggcccgcggggaa
agcatagaaatccgtggttttggcagctttgtcattaagcattacggttcttatgaaggg
cggaatccgaagaccgggaaaaaaatcaaggtcagcccgaagaaattgccattttttaaa
gtcggcaaagacctccgcgaacaggtaaacagcaaacgctaa
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