Desulfofustis limnaeus: DPPLL_04320
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Entry
DPPLL_04320 CDS
T09067
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dlm
Desulfofustis limnaeus
Pathway
dlm03030
DNA replication
dlm03430
Mismatch repair
dlm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dlm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DPPLL_04320
03430 Mismatch repair
DPPLL_04320
03440 Homologous recombination
DPPLL_04320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dlm03032
]
DPPLL_04320
03400 DNA repair and recombination proteins [BR:
dlm03400
]
DPPLL_04320
Enzymes [BR:
dlm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DPPLL_04320
DNA replication proteins [BR:
dlm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DPPLL_04320
DNA repair and recombination proteins [BR:
dlm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DPPLL_04320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
PAS_10
PAS
DEDDh_C
PAS_4
Rv2179c-like
DNA_pol_A_exo1
PAS_9
PAS_8
RNase_H_2
EI24
DNApol_Exo
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
BDD86067
UniProt:
A0ABM7W5A0
LinkDB
All DBs
Position
complement(454132..456240)
Genome browser
AA seq
702 aa
AA seq
DB search
MQRKHPSFWQLVFLSLALTVIFIIGVLAFIWQRLDSSQIGTLKDIAHSSAYHLLALITLV
PVALWVIFEICYTKFYLPLQKIPSEISVIYRTNPAHRLDIQGNRDLRELIEAINDFAKRY
EYLNDHIALEIGKAREETEKDRNLLAAIMAELPLGIIICNSNGRILLFNSQAKKLFAHAH
ARRTSEYFLGLGRSIFHLVDQELINHALEEIQERLAEGKTRIASYFINQMDDQALCLVET
IPVLNEQQSITGFVLSLQQLSTTLQRYDTISDQLIALRQLLHTELGRIELEFPATADENA
LPNRIRSRLATISAEFENAAAAILEAAFETMPLGRIEIERLLFLIQQTTGREHNIRLNVL
PFDRQARMLGDTYSFVAAFALLLEHLSSMCDTDEFDLQVKSSATDIVFLLSWQKRPVGSE
RIGQLLEAKSTSLPRLGYVLKQNRAALQPLPDPDSTCRQIRISARAAPVITPTAEYQSPV
VTGSRPEYYDFNLFEIEDENQDLLNAALSSLTFSVIDTETTGLDPGSDEIVSIGAVRIVK
NRIIYQDRFDQLVNPSRDIPFESYKIHGIDHTMVAAQPTIEHVLPTLHRYLSDTVLIGHD
ISFDLKMLRRKEQQCNLCFSNLALDTLLLSAALHPIHTQHDLQSVAKRYGVTIVGRHTAM
GDAIATAEIFLRLIPILHSKGIVTLEDAVKASKRIYFRRIRS
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggaaacacccctccttctggcaactggtctttctttctctggccctaacggtt
attttcattatcggcgtcctggccttcatctggcaacggcttgacagctctcagatcggc
acgcttaaggatatcgcccacagtagcgcctatcacctgcttgccctgatcacgctggta
ccggttgcgctctgggtcatctttgagatctgctacacaaaattctatttgcccctgcaa
aaaatcccctccgagatttccgtcatctaccgtaccaatccggcccatcgcttggatatt
caaggtaatcgcgaccttcgtgaactgatcgaagcgatcaacgactttgccaagcgctat
gagtatctgaacgaccatattgccctggagatcggcaaggcacgggaggaaacggagaag
gaccgcaatctactggccgctatcatggctgaattaccgctcggtatcatcatctgcaac
agtaacggtcgcatcctgctgtttaattcccaggccaaaaaactgtttgcccacgcccac
gcccggaggacgtcggaatattttctcggcctgggccgatccatctttcatttggtggac
caggagctcatcaaccatgccctcgaagaaatccaggaacgactggccgaaggcaagaca
cgaatcgcttcttatttcatcaaccagatggacgatcaagcgctgtgcctggtggaaacc
atcccggtactcaacgagcagcagtcgatcaccggcttcgtgctgagcttgcagcagctt
tcgaccaccctacagcgatatgacaccatcagcgatcagctgatcgccttgagacagcta
ctgcataccgaattgggccgcatcgaactcgagtttccggcaactgccgatgaaaacgcc
ttgccgaaccggatccgcagccggcttgccaccatcagcgccgagttcgagaacgccgcc
gccgccatcctggaagctgcctttgaaaccatgccgcttggtcgtatcgagatcgaacgg
cttctgtttttgatccagcagaccaccggccgggaacataacatccggctcaatgtcctg
ccgtttgatcggcaggcgcgaatgctcggcgacacctattcattcgtcgccgcctttgcc
ttactcctggaacacctctcgtccatgtgtgacacggatgaattcgacctgcaggtgaaa
tcttcggcaaccgacatcgtttttctcctctcctggcagaagcggccggtcggcagcgaa
cggatcgggcagctgcttgaggcaaagagcactagtctgccacgactcggttacgtattg
aagcagaacagagctgctttgcagccgctgccggaccccgactcaacctgtcggcagata
cggatcagcgcccgggcggcaccggttatcaccccgacggccgaataccaatcaccggta
gttaccggttcccgacccgaatattacgatttcaacctcttcgaaatcgaggatgaaaac
caagacctgctcaatgccgctctgagttcgttgaccttctccgtgatcgataccgaaacc
accgggcttgacccgggtagcgacgagattgtatcaatcggggcggtacggatcgtcaag
aaccgaatcatctatcaagaccgctttgaccaattggtcaacccgtcccgtgacatcccc
ttcgaatcgtataaaatccatggcatcgaccacaccatggtggccgctcaaccgaccatt
gagcacgtactgccaactctccaccgctacctctcggatacggtcttgatcggtcacgat
atcagtttcgacctgaaaatgctgcggcgcaaggaacaacagtgcaacctctgtttctcc
aacctggcgttggacacgctgctgctctccgccgcgctgcatccgattcacacccagcac
gatctgcaaagcgtcgccaagcgctacggcgtcaccattgtcgggcgccataccgccatg
ggagacgccatcgccactgcggaaatctttctcagactgatcccgatcctgcacagcaag
gggatcgttaccctggaggatgccgttaaggcctccaaacggatctatttccgcaggatc
cgctcttga
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