Desulfofustis limnaeus: DPPLL_04520
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Entry
DPPLL_04520 CDS
T09067
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
dlm
Desulfofustis limnaeus
Pathway
dlm00550
Peptidoglycan biosynthesis
dlm01100
Metabolic pathways
dlm01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
dlm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DPPLL_04520 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DPPLL_04520 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dlm01011
]
DPPLL_04520 (mrdA)
Enzymes [BR:
dlm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DPPLL_04520 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
dlm01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
DPPLL_04520 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
BDD86087
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Position
478882..480789
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AA seq
635 aa
AA seq
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MNDKFFEQVEEISERDDRALIMLKRRALFAPFVVLAFFFPIAARFWYLQINKGDQYRQKA
DSNRVRITSLPPPRGHILDHYGREIVTNRPSFNVVMIREDSFEIDDVLKRLAVVLKEDIE
VLWERIRDASGTPRHVPIVLKEDIPWDTLAYLENNKYKFSGIRIEVRPVRTYHYGNLAAN
AIGYIGSINRQQLEQDQEGFYEGGDLIGKRGLELLREKDLRGEKGERSAEVDARGFEQQQ
LKNMEPLPGNDVHLTIDAELQKAAEEYMAIGEKAGAVVVMEVDTGRLLAAASTPTIHLED
FIGGISKKNWDALLNNSRHPLINKVVQAAYPPGSTYKIVTALGGLVEGVIDENTMIYCPG
QYRFGNRTYRCWKRGGHGAVEIRRALAESCDVYFYQVGQRLGVDKLAEYARKLGLGSETG
VDMEYEKAGLIPTKDWKRQRHNEQWHDGETLSVAIGQGFNLTTPLQVCLMTAAVANGGRI
YRPRLVESVTTPDGRVVDRFSPELMSELSEREKHFLPIIRDGLFEVVQGKRGTARQVRIE
GMTVAGKTGTAQVVRLAVYKGMKEEDIPYEYRDHAWFTCYAPADKPEIAVTVLVEHGLHG
GSGAGPVARVMLKKYFEHRLQQMEDSVADASGRNG
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacaagttttttgaacaggtggaagagatcagcgagcgggatgatcgggcgctg
atcatgttgaaacgaagggccttgttcgcgccgttcgtggtcttggcctttttctttccg
atcgctgctcggttctggtatctgcagatcaacaaaggcgatcagtatcgtcaaaaagcc
gattcgaatcgggtgcggatcacctcgttgccgccgccgcgcggtcatattctcgatcac
tacggccgggagatcgtcaccaaccgaccttccttcaacgtggtcatgattcgggaagat
tcctttgaaatcgacgacgtgctgaagcgcctggcggtcgttcttaaagaggatatcgag
gtgttatgggagcggatcagggatgcctcgggaaccccgcgtcatgtcccgatcgtgctc
aaggaggatatcccgtgggacaccttggcgtacctggagaacaacaaatacaagttttcc
ggcatccgtatcgaggttcgtccggtacgtacctatcattacgggaatttagccgccaat
gccattggctatatcggttcgatcaatcggcaacaactggagcaggaccaggaaggcttc
tacgaagggggtgacctgatcggcaaacgtggattggaactgctccgggagaaagacctg
cgcggtgagaagggggaacgttccgcggaagtggatgcccgcgggttcgaacagcaacag
ctgaaaaacatggagccgctaccgggcaacgatgttcacctgaccattgacgccgagttg
cagaaggccgccgaagagtacatggcgattggcgaaaaggccggtgcggtggtggtcatg
gaggtggacaccggacggctgctggccgcagccagcacgccgaccatccatttggaggat
ttcattggcgggatatcaaagaagaactgggacgcactgctgaacaactcccgccatccg
ctgatcaataaggtcgtccaggctgcctatccgcctggttccacgtataagatcgttacc
gctctgggcggattggtggaaggtgtcattgatgaaaataccatgatctattgtcccggc
cagtaccgttttggcaatcgtacgtatcgctgctggaaacgcggggggcatggcgcggtt
gagatcagacgggcactggccgaatcctgcgatgtctacttctaccaggtcggacaacgg
ctcggggtcgataaactggccgaatacgctcgtaagctaggactcggcagcgagaccggc
gttgatatggaatatgaaaaagccggtttgatcccgaccaaggattggaagcgccagcgg
cataacgaacaatggcacgacggggagaccctgtcagtggccatcggccagggcttcaac
ctgacgacaccgctgcaggtctgcctgatgacggcggccgtggccaacggcggccgaatc
tatcgaccacgattggtggagtcggtaacgaccccggatggcagagttgtggatcgattc
tccccggagttgatgagtgaattgtcggaacgggaaaaacacttcctaccaatcatccgg
gacgggttgttcgaggtggttcagggtaagcggggcaccgcccgtcaggtgcgcatcgaa
gggatgacggtggccggcaagaccggtaccgcgcaggtggttcgtctggcagtctacaag
ggcatgaaagaagaagacatcccctacgaataccgggaccatgcctggtttacctgttat
gcaccggccgacaagccggagatagccgtgaccgttctggttgagcacgggttgcacggc
ggttccggggccgggccggtggcgcgggtaatgctgaagaaatatttcgagcatcggctg
cagcagatggaagacagcgtggccgacgcttcgggaaggaatggttga
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