KEGG   Desulfofustis limnaeus: DPPLL_04610
Entry
DPPLL_04610       CDS       T09067                                 
Symbol
polA
Name
(GenBank) DNA polymerase
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
dlm  Desulfofustis limnaeus
Pathway
dlm03030  DNA replication
dlm03410  Base excision repair
dlm03420  Nucleotide excision repair
dlm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dlm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DPPLL_04610 (polA)
   03410 Base excision repair
    DPPLL_04610 (polA)
   03420 Nucleotide excision repair
    DPPLL_04610 (polA)
   03440 Homologous recombination
    DPPLL_04610 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dlm03032]
    DPPLL_04610 (polA)
   03400 DNA repair and recombination proteins [BR:dlm03400]
    DPPLL_04610 (polA)
Enzymes [BR:dlm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DPPLL_04610 (polA)
DNA replication proteins [BR:dlm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     DPPLL_04610 (polA)
DNA repair and recombination proteins [BR:dlm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     DPPLL_04610 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DPPLL_04610 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1 HHH_5 HHH_2 HHH
Other DBs
NCBI-ProteinID: BDD86096
LinkDB
Position
492031..494700
AA seq 889 aa
MSDELYLVDGSAFIYRAFHAVGPLSNRDGLPTNAVFGFASMLRRLLKERQPTYLAVAFDS
RGPGFRHELYRAYKANRPAMPDELACQIPYIKELVQALGLVSFEQPGVEADDLIASAVSR
LDAAEHPIVIVSGDKDLLQLVNDRVTLWDPMSDKVMDRAAVAAKYQVEPELLLQSFALIG
DSSDNVPGVPGVGPKTAGTLIRQYGSLEALYDQVDGLKQSKMKQNLLEHREQAFLSRDLI
RLKHDCAVPPTIDGYRLGSSDQERLKGLYADLGFASLLKELDTARPLAGDDFHLVTSEHQ
LAELASILHQAEVLAIDTETTSLDSRTAGLVGISLCCGLPSCWYIPVGHRDRDGQPLSGQ
VSLEALRTMLQPVLQSKKLPKIGHNLKYDYTVLACALGVELKGPLIDTMIAAYLTEPARR
SLKLDDLCREIDLKLTSYGEVTGGDKRQDAFAYVEPASACHYSCEDVYGTLALWEHLQPR
LEEKDMGGLFHEIEMPLMPILAKMEMTGIKVDPARLEALAEEFREKLASLEQQIYQAAGH
PFNINSPQQLGTVLFEELGLPHGKKTKTGYSTDGAVLEKLAVGHELPALIIEYRNLAKLL
STYVDKLKHLIHGDTGRVHTSFNQTVTATGRLSSSNPNLQNIPVRGEEGGRIREAFVAEA
GKVFLFADYSQIDLRVLAHYSQDTALLKAFRQGEDIHTRTAAEIFGVSPLLITPEMRRVA
KSINFGIVYGMSSFGLSNQLQISRAEAKKFIDRYFQLYAGVQRFMQEIVEQARRDGYVST
LLNRRRYLPEIKAADKVRREFAERAAINTPIQGTAADIIKLAMLRVNELLRDRDSQCRML
LQIHDELVFEVDESFCAAIKGDIRTCMEQALSLDVPLVVNMGEGRSLAK
NT seq 2670 nt   +upstreamnt  +downstreamnt
gtgagtgacgaactatacctggtggatggtagcgctttcatctaccgtgcttttcatgcc
gttggcccgctcagtaatcgagacggtctgccgaccaacgccgtgttcggtttcgccagt
atgctgcgccgcctgctcaaggaacggcagccgacctacctggcggtggcctttgacagt
aggggcccggggtttcgtcacgagctctaccgtgcctataaggccaaccggccggccatg
ccggacgaactggcctgtcagatcccctacatcaaggagctggtgcaggcacttggcctg
gttagcttcgaacagcccggcgttgaggccgacgacctgatcgcatcggcggtttctcgt
cttgacgcggcggagcaccccatcgtcatcgtgtccggagacaaggatctgttgcagctg
gtcaacgatcgggtcacgctctgggacccgatgagcgacaaggtcatggatcgggccgcg
gtggctgccaaataccaggtcgaaccggagctgctgctgcagagcttcgcgctgatcggc
gacagttccgacaatgttcccggagtccccggcgtcggcccgaaaaccgccggcaccttg
attcgccagtatgggagtctggaagcattgtacgatcaggttgacggattgaagcaatcg
aaaatgaaacaaaacctgctcgaacatcgcgagcaggccttcctgtctcgggacctgatc
cgtctcaaacatgattgcgccgtaccgcccaccattgacggctatcgactcggctcatcg
gaccaggagcggctgaaggggttgtatgcggatctcggttttgccagtctgctcaaggag
cttgacacggcccgtccgttggctggagatgattttcacttggtgaccagcgaacatcag
ttggctgagctggcttcgatcttacaccaggcggaggtgctggccattgacacggagacc
acttccctggacagtcgtactgccggattggtgggtatctcgttgtgctgcggacttccc
tcctgctggtatatccccgtcggccaccgagaccgtgacgggcaaccgctgtccgggcag
gtgagcctcgaggcgttgcggacgatgttgcagcccgtactgcagtcgaagaagctgccg
aagatcgggcataatctcaaatacgactacaccgttctcgcctgtgccctgggtgtggaa
ttaaagggtccgttgatcgacaccatgattgccgcctatctcaccgagccggcgagacga
tcgctgaaactggacgacctgtgtcgggagatcgatctgaaattgaccagctatggcgaa
gttaccgggggggacaagcgccaggacgcgttcgcttatgtggagccagcctccgcctgt
cactattcctgcgaggatgtctatgggacgctggccttgtgggagcatctgcagccgcgg
ctcgaagaaaaagacatgggtggactgtttcacgagatcgaaatgccgctgatgccgatc
ctggcgaagatggagatgaccggcatcaaggtcgatccggcacggttggaggcgcttgcc
gaggagtttcgggaaaaattggcaagcctggaacagcagatctatcaggcggccggtcat
ccgttcaacatcaactcaccgcagcagttggggacggtgttgttcgaagagttgggtcta
ccgcacggcaagaagaccaagaccggttattccaccgatggcgccgtcctggaaaaattg
gcggtcggtcacgaactgccggccctgattatcgaatatcgtaatctggccaaactgctt
tccacctatgtggacaagctgaagcacctgatccacggggataccggccgggttcatacc
tcgttcaaccagacggtgacggcgaccggccggctctccagcagtaatccgaacctgcaa
aacatcccggtccgtggcgaagaggggggacggatccgcgaggccttcgtcgccgaggcg
ggcaaggtctttctctttgccgactattcacagatcgatctgcgggtgctggcccattac
tcgcaggatactgctcttcttaaagcgtttcgccagggcgaggatatccacacccgcacg
gcggcggagatcttcggcgtttcgccgttgttgataacaccggagatgcggcgggtggcc
aagagtatcaattttggcattgtctacggcatgagcagctttggcctgtccaatcagctg
cagatcagcagggcagaggcgaagaaattcatcgaccgttatttccagctgtacgccggc
gtgcagcggtttatgcaggaaatcgtcgagcaggcccgccgggacggttatgtctccacc
ctgctcaatcgacggcgttatttgccggagatcaaggcggccgacaaggttcgccgagaa
tttgccgaacgggccgcgatcaatacaccgatccaggggaccgcggcggatatcatcaaa
ctggccatgctccgggtcaacgagctgttacgcgatcgggattcccagtgccgaatgctg
ctgcagattcatgacgaactggttttcgaagtggatgaatcgttctgcgccgccatcaaa
ggcgatatccgcacctgcatggaacaggccctgagcctggacgtgccgttggtggtcaac
atgggcgaggggcgaagcctcgccaagtag

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