Desulfofustis limnaeus: DPPLL_08400
Help
Entry
DPPLL_08400 CDS
T09067
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dlm
Desulfofustis limnaeus
Pathway
dlm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dlm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DPPLL_08400 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dlm03019
]
DPPLL_08400 (recQ)
03400 DNA repair and recombination proteins [BR:
dlm03400
]
DPPLL_08400 (recQ)
Enzymes [BR:
dlm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DPPLL_08400 (recQ)
Messenger RNA biogenesis [BR:
dlm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DPPLL_08400 (recQ)
DNA repair and recombination proteins [BR:
dlm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DPPLL_08400 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
zf-CXXC
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
BDD86475
LinkDB
All DBs
Position
907528..909336
Genome browser
AA seq
602 aa
AA seq
DB search
MTQSIRQTLKRVFGYDEFRPAQQEIVECVLAGNDCFVLMPTGGGKSLCYQLPALLRPGVG
VVVSPLISLMKDQVDALQACGVQAAYYNSSLSGAEARRVLAQLHDGRLDMLYVAPERLMG
DDFLARLATLPLALFAIDEAHCISQWGHDFRPEYRQLGELRHHFPAIPIIALTATAEPHT
RKDIIERLHLGGARSFITGYDRPNIRYTVVEKQKPLVQLREFVQGRPDDAGIVYCLSRKR
VDKVCEQLVAAGFSAAPYHAGLPDSLRRDVQERFLFDKVRIIVATVAFGMGIDKSNIRYV
VHYDIPKNIEGFYQETGRAGRDGLPAEALLLFGYGDIQVARGLIDKTTNPDHRRIELHKL
NTMVGFAEALGCRRRVLLGYFGEQPQEDCGNCDICLNPPEMIDITEDSRKALSCVFRVGQ
RFGAGHVIAVLRGSSQERIVRLGHHHLSTYGIGADRDQDYWGSIIRHLVQRGYLSQDVGD
YSVLRLTDAAWPLLRGERPLSMARPRTRTGPPKAKGGTIRGSDEEYDRDLFDRLRLVRKE
LAERRGVPPFVIFHDKTLVEMAGRKPQNEGELLAINGVGEAKCRSYGTDFLAAIRDYLSA
GR
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagtccatccggcagacgctgaagcgcgttttcggatacgacgaatttcggccg
gctcagcaagagatcgtcgaatgtgtgctggccggtaacgattgcttcgtcctgatgccc
accggtggcggcaaatcactctgttatcagttgccggcgttgctccggccgggtgtcggt
gtcgtcgtgtcgccgctgatctcgttgatgaaggaccaggtggacgcgctgcaggcctgc
ggtgtgcaggccgcctactacaactcgtcattgagtggtgccgaagcgcgccgtgtgctg
gcgcagctccacgacggccggctggatatgctctatgtcgcgccggagcggctgatgggt
gacgattttttggctcgcctggccacgcttcccctggccctgttcgccatcgacgaagcc
cactgcatttctcagtggggacacgattttcgccctgaatatcgccagctgggggagctg
cgccaccattttccggcgatcccgatcattgccctgacggccaccgccgaaccgcatacc
cgcaaagacattatcgaacggctccatctggggggagcgcgctccttcatcaccggttac
gatcggcccaatatccgttatacggtagtcgagaaacagaagccgcttgtccagctgcgt
gaatttgtgcaaggacgcccggacgatgccggcatcgtctattgcctgagccgcaaacgg
gtcgacaaggtctgcgagcagctggtggccgccgggttctccgccgcaccctatcatgcc
ggcttgccggattctctgcgccgcgatgtccaggagcggtttctcttcgacaaggtccgc
attatcgtggccaccgtcgctttcgggatggggatcgacaagtccaatatccgttacgtg
gtccattacgatatcccgaagaacatcgaggggttttaccaggaaacgggccgggccggg
cgggacgggctgccggccgaagccctattgctcttcggctacggcgatatccaggtggct
cgcggtctgatcgacaagacgaccaatccggatcaccggcgcatcgagttgcacaagctc
aataccatggtcggctttgccgaagcgctcgggtgccgccgtcgagtcctgctcggctat
tttggtgagcagccgcaggaggattgcggtaattgcgatatctgcctgaacccgccggaa
atgatcgatattaccgaagacagtcgcaaggcgttgtcctgtgtgtttcgggttggccag
cgtttcggtgccggtcacgtgatagcggtcttgcggggatcgagccaggaacgcatcgtg
cggcttgggcaccatcacctgtccacctatggcataggcgccgatcgcgaccaggattac
tggggcagtatcatcaggcatctggtccagcgcggctacttgagccaggacgtgggggac
tattcggtgcttcgcttgactgacgcagcttggccgctgctacggggtgaacgtcctttg
tccatggcccgaccccggaccagaaccgggccgccgaaggcgaaagggggaacgatccgc
ggctccgatgaggagtacgatcgggatttatttgatcggttgcgcctggttcgcaaggaa
cttgccgagcgtcgcggggtcccgccctttgtcatctttcacgataagaccctggtggag
atggccggcagaaaaccgcagaacgaaggcgagctgttggcgatcaatggtgtcggagaa
gccaagtgcaggagctacggcaccgatttcctggcagcgatccgggactatctgagtgcc
ggcaggtga
DBGET
integrated database retrieval system
