Desulfofustis limnaeus: DPPLL_09650
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Entry
DPPLL_09650 CDS
T09067
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
dlm
Desulfofustis limnaeus
Pathway
dlm00260
Glycine, serine and threonine metabolism
dlm00460
Cyanoamino acid metabolism
dlm00630
Glyoxylate and dicarboxylate metabolism
dlm00670
One carbon pool by folate
dlm00680
Methane metabolism
dlm01100
Metabolic pathways
dlm01110
Biosynthesis of secondary metabolites
dlm01120
Microbial metabolism in diverse environments
dlm01200
Carbon metabolism
dlm01230
Biosynthesis of amino acids
dlm01240
Biosynthesis of cofactors
dlm04981
Folate transport and metabolism
Module
dlm_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
dlm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DPPLL_09650 (glyA)
09102 Energy metabolism
00680 Methane metabolism
DPPLL_09650 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DPPLL_09650 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
DPPLL_09650 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DPPLL_09650 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DPPLL_09650 (glyA)
Enzymes [BR:
dlm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
DPPLL_09650 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
BDD86600
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All DBs
Position
1038229..1039518
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AA seq
429 aa
AA seq
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MNEADFNVEEMMVATMDAVKDTDPEIYELIKQEERRQRDKIRLIASENYVSAAVLQATGS
VLTNKYSEGYPGRRYYEGQQVIDQVEALAVERAMELFGAEHVNVQPYSGSPANLAVYLAF
LSPGDVILGMALPHGGHLTHGAPVSISGKYFRAQSYTLNRETGLIDYQQILEKARQYRPK
IIIAGHSAYPRIIDFEQFRRIADEVGALFMVDMAHFAGLVAGGAHPSPLPWADVVTTTTH
KSLRGPRGAIIMCRREYAAAIDKAVFPGLQGGPHNNTTAAMAVAFKEAATPEFADYARQI
VNNSRALAEVLAKRDFQLITGGSDNHLLLIDLTNKEITGKTAAKALDRAGIVVNYNAVPF
DTRKPGNPSGIRVGTAALTSRGFKEREMFQVGEWINAVVAEPENERLIEEIAADVASFCR
DFPPPGIDC
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaggccgatttcaacgtggaagagatgatggtagcgactatggacgcagtaaag
gataccgatccggaaatctatgaattgatcaagcaggaagaacgccggcagcgtgacaag
attcgcctgattgcctcggaaaattacgtgtctgctgcggtcttgcaggccaccgggtcg
gtgttgaccaacaaatactcggaaggatatcccggtcgtcgctactatgaagggcagcag
gtgatcgaccaggtggaggcgctggccgtcgagcgagccatggagttgttcggtgccgag
catgtgaacgtccaaccctattccggctcaccggcaaatcttgccgtctacctggccttt
ctcagtcccggtgatgtgatcctcggtatggctctgccccatggggggcacctgacccat
ggcgccccggtcagcatctccggcaaatatttccgagcgcagagttacaccctcaaccgc
gagaccggtttgatcgattatcagcagatcctggaaaaggcccgccagtaccggcccaag
atcatcatcgccggtcattcagcgtatccgaggattatcgacttcgagcaattccgtcgc
atcgccgatgaggtcggggccctgttcatggtggacatggcccatttcgccgggttggtt
gcggggggcgcgcatccctctccgctgccgtgggccgacgtggtgaccaccaccacccat
aaatcactgcgcggtccgcgtggagcgatcatcatgtgtcgccgcgagtatgcagctgcc
atcgacaaagccgtcttccccggcttgcagggaggcccgcataataataccacagcggcc
atggccgtggccttcaaggaagccgcgaccccggaatttgccgactatgcacggcagatc
gtgaacaattcgagagccctggccgaagtcctggcaaagcgcgattttcagttgatcacc
ggcgggtccgacaaccacctgctgctcatcgacctgaccaacaaagagattaccggcaag
accgcggccaaggctcttgaccgggcgggaatcgtggtcaactacaatgcggtgcccttc
gataccagaaaaccgggcaatccgagcggtattcgtgtcggcactgcggcgctcaccagt
cgcgggtttaaggagcgtgagatgttccaggtcggcgagtggatcaacgccgttgtggca
gagcctgaaaatgaacggctcattgaagagatcgccgccgatgtcgcctccttctgccga
gatttcccaccgccggggatcgattgctga
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