Desulfofustis limnaeus: DPPLL_10720
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Entry
DPPLL_10720 CDS
T09067
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
dlm
Desulfofustis limnaeus
Brite
KEGG Orthology (KO) [BR:
dlm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dlm03016
]
DPPLL_10720 (rnd)
Enzymes [BR:
dlm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
DPPLL_10720 (rnd)
Transfer RNA biogenesis [BR:
dlm03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DPPLL_10720 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
BDD86707
LinkDB
All DBs
Position
complement(1146036..1147142)
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AA seq
368 aa
AA seq
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MIADTQELSQLIDQARSVPYVALDTEFVWERTYYPQLGLIQLALAADQCYLIDPLAIDDL
SSLGTLLADSNVVKILHDAPQDLAILSRATGSMPSAIFDTRVAAGFAGLSSTIGLAELIT
TLLGIELEKSQTRTDWLKRPLAPQQMAYALDDVRYLGAVRAALLDRITAGVIRNWLHEEL
DMVHQPTPLTGNDDQQRYRKVKGAVTLHGKEVAVLRELTAWREREARRLDRPRGHLLTDA
QLIDLAKTACTNRDELKAAGLLSPKKLQRYGETILALIRAGRSVPPHQVPRIEAPTRLNK
REKMRYERLLEEIRHRCEALAIDPQLVGSAAELRLVVRHADAPDNRLPAKFRQGWRRTFL
EEYLVQPG
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccgatacgcaagaactcagccagctgatcgaccaggcccgctctgtaccatac
gttgcgctggataccgagtttgtctgggaacgcacctattacccgcagctgggcctcatc
cagctggctcttgccgctgaccaatgctatctgatcgacccgctggccatcgacgatctg
tcgtcgctgggcacgctactggccgacagcaacgtggtgaaaatcctccacgacgccccg
caggatctggccattttgtcccgggccaccgggtcgatgccaagcgccatcttcgacacc
agggtggccgccggattcgccggcctttcctcgaccatcggtctggcggaactgatcacc
accctgctcggcatcgagctggaaaagagccagaccaggaccgattggctgaaacggccg
ctggcaccgcaacaaatggcatacgccctggacgacgtccgctatcttggggcagtgcgt
gctgcgctgctggaccggatcacggcaggcgtgatccgaaactggctgcacgaggagctg
gacatggtacaccagccgacgcccctgaccggcaatgacgatcagcagcgataccgcaag
gtcaagggtgcggtcaccttgcacggcaaggaagtggcggtgttgcgggagctgacggcc
tggcgggaacgggaggcacgacggctcgaccgcccccgaggccatctcctcaccgacgcg
cagctgatcgatttggcaaagactgcctgcacgaacagggatgagctgaaagcggcaggc
ctgctgtccccgaaaaaactgcagcgctacggcgagacgatcctcgcgctcatccgtgcc
ggcagaagcgtcccgccacaccaggttccccggatcgaagcaccgactcgtctgaacaaa
cgggagaaaatgagatacgaacgtttgctggaagagatccggcaccgttgcgaagcgctg
gcgattgatccgcagttggtcggctcggccgccgaattgcggctcgtggttcgacacgcc
gacgcccccgacaaccgtctgccggccaagttcagacaaggctggcgccgaacgtttctc
gaggagtatctggtgcagccgggttga
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