Desulfofustis limnaeus: DPPLL_11330
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Entry
DPPLL_11330 CDS
T09067
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
dlm
Desulfofustis limnaeus
Brite
KEGG Orthology (KO) [BR:
dlm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dlm03016
]
DPPLL_11330 (truA)
Enzymes [BR:
dlm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
DPPLL_11330 (truA)
Transfer RNA biogenesis [BR:
dlm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DPPLL_11330 (truA)
Prokaryotic type
DPPLL_11330 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
BDD86768
LinkDB
All DBs
Position
complement(1205446..1206213)
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AA seq
255 aa
AA seq
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MRTIKLTIAFDGTGYCGWQRQHNGISIQQELERAASTICNQRIDIHGAGRTDAGVHAIGM
TAHFRAATALPGAVLQKGMNALLPTAIRVITVDDEAPSFHARFSALAKTYRYAVSCGPVL
LPQQRLYTAHLPYRLDCGDLQTCLAVISGTHDFSSFETTGSRDRTITTGRGAVRTIFRAE
LREPEPGLLHLCFTGDGFLRHMVRNLTGTLLEVGRGKRTVQEFRDIVQLRDRNRAGATAP
AHGLTLLAVHYAHDW
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaccatcaaactgaccatcgcctttgacggcaccggctattgcggctggcaacgg
caacataacggcatctccatccagcaggaactggaacgggccgcctcaaccatctgcaat
cagcgaatcgacatccacggcgccggccgcaccgacgccggggtccatgccatcggcatg
accgcccacttccgcgccgccaccgccctgcccggcgcggtcctgcaaaaggggatgaac
gcactgctgccgacagcaatcagggtcattaccgtggacgacgaggccccgtccttccac
gcccgtttctccgccctggccaagacctatcgctatgccgtctcttgcggtccggtgctc
ttgccccagcaacggctgtacaccgcccacctgccctaccggctcgactgtggggacctt
cagacctgcctggcggtcatttccggcacccacgatttttccagtttcgaaaccaccggc
tcacgggacagaacgatcaccaccggacgcggcgcggtgcgcaccattttccgggcagag
ttgcgggaacccgaaccaggactgttgcacctctgtttcaccggcgacggtttcctgcgc
cacatggtcagaaacctcacgggaacactgctcgaggttggaagaggcaagcgcacggtt
caggaattccgtgatatcgtgcagctccgggatcgcaatcgggccggggccaccgccccg
gcgcacggcctgacgttgctggccgtgcattatgcgcacgattggtag
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