Desulfofustis limnaeus: DPPLL_11490
Help
Entry
DPPLL_11490 CDS
T09067
Symbol
recD
Name
(GenBank) RecBCD enzyme subunit RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dlm
Desulfofustis limnaeus
Pathway
dlm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dlm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DPPLL_11490 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dlm03400
]
DPPLL_11490 (recD)
Enzymes [BR:
dlm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DPPLL_11490 (recD)
DNA repair and recombination proteins [BR:
dlm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DPPLL_11490 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
SH3_13
Helicase_RecD
UvrD-helicase
AAA_22
Herpes_Helicase
AAA_16
SLFN-g3_helicase
RecD_N
UvrD_C
DEAD
NACHT
nSTAND3
Mg_chelatase
ATPase
AAA_28
Motif
Other DBs
NCBI-ProteinID:
BDD86784
LinkDB
All DBs
Position
1223784..1225424
Genome browser
AA seq
546 aa
AA seq
DB search
METPSLEHYLAGFLTDRCGLHGEARRICGETIRRLLEALRDGHSCLQVSGQERSVVVTSP
LVSDGEPAPLVLCGTRLYLHRVYQQEVRLADRLRELAAAPLEEPGGVELLDRFFPACDDG
PDWQREAARTAISGRLTIIAGGPGTGKTTTVARIVGLLLAGSGPRFSVVLAAPTGKAAIR
LIEALRRQMVHLPLSAEELRRFPETAHTVHRLLGLHRFAGTARYSRDNPLPADAVVVDEA
SMVDLALMSRLAEALAPGSRLILLGDKDQLASVESGAVLSDCIAGLPQRVVELRRSWRFN
RAIARFAAAVNDGEAEQAWRLLNDSDGGVVGAPADWRERVGARYRRFMDAAVDAAAPSDY
AGLFAAFNRFRVLTALRHGPWGAAGINDWVEWYLARQGYPLVGRRWYPGRPVLITRNDYS
LGLANGDIGLCLPDPHHQGELAVWFEQPGDVVRRLAPTQLPACETAWAMTIHKSQGSEFD
EVTVVLPDSTNQILCRELLYTAVTRARERVQLVADREALRAAVLKRTRRCSGLVARLQNR
EKEETP
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccccgtctctcgaacattacctggccggctttcttaccgaccgctgcggtctg
cacggcgaggcgcgccggatatgtggcgaaaccatccggcgcctgctcgaggccctgcgt
gacggacacagctgtctccaggtgagcggccaagagcgttcggtggtggtgacctcgccg
ttggtgtccgatggcgagccggcaccgctggtcctctgcggtactcgtctctatctccat
cgcgtctaccaacaggaggtgcggttggccgaccggctgcgggagctggcggcggcgccg
ctggaagagccgggaggtgtcgagctgctcgaccgattttttcccgcctgtgacgacggg
ccggactggcagcgggaggccgcccgtaccgccatctccgggcggttgaccatcatcgcc
ggcgggccgggtaccggcaagacgacgacggtggcgcggatcgtcggcctgctgctggcc
ggttcgggacctcggttttccgtcgtgctcgccgcgcctaccggcaaggcggcgatcagg
ctcatcgaggcgctcagacggcagatggtccacctgccgttgagcgctgaggagctgcgc
cggtttcccgagacggcgcacaccgtgcaccgcttgttgggcctccaccgttttgccggt
acggctcgttactcccgggacaacccgctgccggccgatgcggtggtggtcgacgaagcg
tccatggtcgacttggccctgatgagcaggctggcggaggcgcttgctcccggttcccgg
ctgatcctgctcggcgacaaggaccaattggcctcggtggaatcgggggcggtgctgagc
gattgtatcgccgggttgccgcaacgggtggtggagttgcggcgcagctggcgcttcaat
cgggccattgcccggtttgcggcggcggtcaacgacggtgaggcggagcaggcctggcgg
ctgctcaacgactccgacggcggggtggttggcgcaccagcggactggcgggagcgggtc
ggcgcgcgctatcggcgtttcatggacgcggcagtcgacgctgccgcgccctcggattac
gccggcctgttcgccgctttcaaccggttccgggtgttgacggcactgcgccacggaccg
tggggggcggccggaatcaatgactgggtggagtggtatctggcccgccaggggtatccc
ctggttggccggcggtggtatcccggccggccggtgctgatcacccgcaatgattattcg
ttgggactggccaacggcgatatcggtctctgcctgccggacccgcaccatcagggggaa
ctggccgtatggttcgagcagcccggggacgtggtgcgccgcttggcccccacccagctg
cccgcctgtgagaccgcctgggcgatgaccatccataagagccagggttccgagttcgac
gaggtgaccgtggtcctgcccgattcgaccaaccagatactgtgtcgggaattgctctac
accgccgttaccagggcgagagaacgggtgcaactggtggctgaccgggaagcgctgcgg
gcggcggtactgaagcggacgaggcggtgcagcggcttggtagcgcggttacagaatagg
gagaaagaggagacgccatga
DBGET
integrated database retrieval system
