Desulfofustis limnaeus: DPPLL_15460
Help
Entry
DPPLL_15460 CDS
T09067
Symbol
hopD
Name
(GenBank) transcriptional regulator
KO
K03530
DNA-binding protein HU-beta
Organism
dlm
Desulfofustis limnaeus
Brite
KEGG Orthology (KO) [BR:
dlm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dlm03032
]
DPPLL_15460 (hopD)
03036 Chromosome and associated proteins [BR:
dlm03036
]
DPPLL_15460 (hopD)
03400 DNA repair and recombination proteins [BR:
dlm03400
]
DPPLL_15460 (hopD)
DNA replication proteins [BR:
dlm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DPPLL_15460 (hopD)
Chromosome and associated proteins [BR:
dlm03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
DPPLL_15460 (hopD)
DNA repair and recombination proteins [BR:
dlm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
DPPLL_15460 (hopD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
UBA_HYPK
HU-CCDC81_euk_1
DUF2267
Motif
Other DBs
NCBI-ProteinID:
BDD87181
LinkDB
All DBs
Position
1652025..1652297
Genome browser
AA seq
90 aa
AA seq
DB search
MNKKELIESIAGAAEISKAAAEKALNATMAAVADALKKGDKVTLVGFGTFSVAKRDARTG
RNPQTGKSIKIPAKKIAKFKAGSKLSDAIN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaaggaactgatcgagagtattgccggagcagccgaaatcagcaaagccgca
gccgaaaaggcactgaatgcgacgatggcagccgttgccgacgccttgaaaaaaggcgac
aaagttaccttggttggattcggaacgttctctgttgctaaacgtgacgcccgtaccgga
cgcaatccccagaccggaaaatccatcaaaattccggccaaaaagattgccaagttcaaa
gcaggcagcaaactgtcagacgccattaactga
DBGET
integrated database retrieval system
