Desulfofustis limnaeus: DPPLL_19370
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Entry
DPPLL_19370 CDS
T09067
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
dlm
Desulfofustis limnaeus
Pathway
dlm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dlm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DPPLL_19370 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dlm03400
]
DPPLL_19370 (uvrB)
DNA repair and recombination proteins [BR:
dlm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DPPLL_19370 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DPPLL_19370 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
DUF87
Endonuclease_1
Microtub_bd
HAUS5
Motif
Other DBs
NCBI-ProteinID:
BDD87572
UniProt:
A0ABM7W9N7
LinkDB
All DBs
Position
complement(2080255..2082279)
Genome browser
AA seq
674 aa
AA seq
DB search
MMESPFQLVSPFSPAGDQPQAIDRLAAGLQRGERDQVLLGVTGSGKTFTMAGIVERVQRP
TLVIAPNKILAAQLFSEFKELFPNNAVEYFVSYYDYYQPEAYIPQTDTYIEKDSSINDAI
DKMRHSATRSLLTRRDVLIVASVSCIYGLGSPDEYRNMHLQLRCGAEQPPETVQRRLVFM
QYERNDLSFHRSTFRVRGDVIDIFPAHEEERAVRVEYFGDTVESITVIDPLRGVVLERLD
EYTVFPGSHFVTSRERLQIALRTIKEELRGRLEQLHGENRLVEEQRLEQRTLFDLEMLQE
MGYCNGIENYSRHLTGKPAGMPPPNLLDYFPEDYLIFIDESHIGIPQLNGMYNGDRSRKQ
TLVNYGFRLPSALDNRPLRFEEFEKRVNQIIYVSATPGPYELERAQGRVVEQVIRPTGLL
DPVIEVRPASSQVDDLLHEIRLRSERGEAVLVTTLTKRMAEELTDYYEKLGVRVRYLHSD
IKTLERVELVRDLRNHEFDVLIGINLLREGLDIPEVSLVAVLDADKEGFLRSDRSLIQTC
GRAARNVNGMVIMYADDITGSMQRTIDETGRRRALQESFNREHEIVPQTVVSSVKDTIHQ
YLREAGYQFADEGGGKQTAVAEEAFAYRSVAELEREIGRLEKQMQAAARELAFEEAARLR
DRIKALRTLEIELG
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgatggagtcgccctttcaattggtcagccccttttccccggcgggcgaccaaccgcag
gccatcgaccggttggcggcgggcctgcagcggggagagcgggaccaggtgctgctcggt
gtcaccggcagcggcaagaccttcaccatggccggcattgtcgagcgggtgcaacggccg
accttggtcattgcccccaataagatcctggcagcacagttgttcagtgagttcaaggag
ttgtttccgaacaacgcggtggaatacttcgtctcctactacgattattatcagcccgag
gcgtatatcccccagaccgacacctatatagaaaaggattcgtcgatcaacgacgccatc
gataagatgcgccactccgccactcgctcgctgctgacccggcgcgatgtgctgatcgtg
gcctcggtttcctgtatctacggtcttggttcgcccgatgagtatcgcaacatgcatctg
cagctgcgttgcggtgccgaacaaccgccggagacggtgcagcggcggctggttttcatg
cagtatgagcgtaacgacctgtcttttcaccggtcgacgtttcgcgtgcgaggcgatgtg
atcgacatcttcccggcccacgaggaggagcgggcggtgcgggtggaatacttcggcgac
acggtcgagtcgattaccgtcatcgatccgctgcgcggcgtggtgttggagcggctcgac
gagtacaccgtcttccccggttcccacttcgtcacgtcccgggagcggttgcagatcgcc
ttgcgcaccatcaaggaggaactgcgggggcggctcgagcagttgcacggtgaaaaccgg
ctggtggaggagcagcggctcgaacaacggacgctgtttgatctggagatgctgcaggag
atgggctattgcaacggcatcgagaactatagccggcatctgaccggtaagccggcagga
atgccgccccccaacctgctcgattattttcccgaggactacctgatcttcatcgacgag
agccatatcggcatcccgcagctcaacggcatgtacaacggcgaccggtcgcgcaagcag
acgctggtgaactacgggttccgtctgccttcggcgctggacaaccgacccctgcgtttc
gaggagtttgaaaaacgggtcaaccagatcatctatgtgtcggcaacccccggcccctat
gagttggagcgcgcccaggggcgagtggtggaacaggtgatccggcccaccgggctgctc
gatccggtcatcgaggtgcggccggcctccagtcaggtggacgatttgctgcacgagatc
cgcttgcgcagcgagcgcggcgaagcggtgctggtgacgacgctgaccaagcggatggcc
gaggaactgaccgattattatgagaaactcggggtgcgggtccgctacctgcattccgac
atcaagacgctggagcgggtggaactggtgcgtgatctgcgcaaccacgagtttgacgtg
ctgatcggcatcaacctgctccgtgaagggctcgacatccccgaggtatcgctggtggcg
gtgctcgatgccgacaaagaagggttcctccgttccgatcgctccctgatccagacctgc
ggcagggcggcccgcaacgtcaacggcatggtgatcatgtatgccgatgacatcactgga
tcgatgcagcggaccatcgacgagaccgggcggcgtcgggccttgcaggagagttttaac
cgagagcacgagatcgtgccgcagaccgttgtctcttcggtcaaggacaccatccatcaa
tacctgcgcgaggccggctaccagtttgccgacgagggcggcggcaagcagacggcggtg
gcggaagaggcgtttgcctaccggtcggtggcggagctggaacgggagatcggccggctg
gagaaacagatgcaggcagctgcccgggaactggccttcgaggaggcggcccggctgcgg
gatcggatcaaggcgctgcgcacattggagatcgaactcggatga
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