Desulfofustis limnaeus: DPPLL_20890
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Entry
DPPLL_20890 CDS
T09067
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
dlm
Desulfofustis limnaeus
Pathway
dlm03030
DNA replication
dlm03430
Mismatch repair
dlm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dlm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DPPLL_20890 (dnaX)
03430 Mismatch repair
DPPLL_20890 (dnaX)
03440 Homologous recombination
DPPLL_20890 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dlm03032
]
DPPLL_20890 (dnaX)
03400 DNA repair and recombination proteins [BR:
dlm03400
]
DPPLL_20890 (dnaX)
Enzymes [BR:
dlm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DPPLL_20890 (dnaX)
DNA replication proteins [BR:
dlm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DPPLL_20890 (dnaX)
DNA repair and recombination proteins [BR:
dlm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DPPLL_20890 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
RuvB_N
AAA_5
AAA_22
TIP49
AAA_16
AAA_30
AAA_14
AAA_19
AAA_24
PIF1
AAA_18
TsaE
ResIII
AAA_2
DNA_pol3_delta
nSTAND3
Mg_chelatase
Sigma54_activat
DUF815
DEAD
Rad17
AAA_assoc_2
Motif
Other DBs
NCBI-ProteinID:
BDD87724
LinkDB
All DBs
Position
2273688..2275460
Genome browser
AA seq
590 aa
AA seq
DB search
MSYLVLARKFRPQSFADVVGQKPVVKTLQNSLKRGRVAHAILFSGVRGVGKTTLARLMAK
ALNCASGPTPTPCNSCSSCRQIAAGTALDLHEIDGASNRGIQEVRDLKDKIKFMPAAARY
KVIIIDEVHMLTTEAFNALLKTLEEPPEHVYFMFATTELHKIPITILSRCQRYELQRVTG
AELGEHFSRLAAAEGVSLEAAALALIVREAEGSVRDGLSLLDQVFSYGDEHITARDVADV
LGLVGRDVLHDIARALLGSDRQTALARLADAFEHGMDLKRFMNDLLDCFRSLMLIRISGC
EHLIELPAEEIALLAETARQHSLETIHQQLNLLLQTAETIRHSSQPRLALEIAFLSIIES
GNVIGVETLLSQLDEVLGKLPEPEPPATAPAESGSRSGPPPVDSPPVKAAAPPRPPSTND
LPAAPPPSAEPPPVAPPSPAAARDSSSGQPEKTTPPPPSPGGTKQIRKDWLDFIAYVRNR
REWMAQNLQQATAVKEHGSELNLEFDTPAECALLRSKENRQALTEYVLDFFQKDFTIHII
SPEDPDDPGVAVEDGPKKRRQQLAAHPLVRMTEEIFGGQAGDIRISQPNR
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatctggtcctcgcccgcaaattcagaccgcagagtttcgccgacgtggtcggt
cagaagccggtggtcaagaccttgcaaaacagcctcaagcgcggtcgggtcgcccacgcc
atcctcttttccggggtccggggcgtcggcaagacaacgctcgcccggctgatggccaag
gccctcaactgcgcttccggaccgacgccaactccctgtaactcctgttcctcctgccgg
cagatcgccgccggcacggcgctcgatctccacgagatcgacggcgcctccaaccgcggc
atccaggaagtccgagacctcaaggacaagatcaagttcatgccggccgcggcgcgatac
aaggtgatcatcatcgacgaagtgcatatgctcaccaccgaggccttcaacgccttgctg
aagaccctcgaggagccgcccgaacacgtctatttcatgttcgccaccaccgagctgcac
aagattccgatcaccattttgtcccgttgccagcgctacgagttgcagcgggtcaccggg
gctgaactgggcgaacatttttcccggctggccgccgccgaaggagtctccctggaagct
gccgccctggccctgatcgtcagggaggctgagggttcggtccgcgacggtctgagcctg
ctcgaccaggtattctcctatggcgacgagcatatcaccgcccgcgacgtggccgacgtg
ctggggctggtcggccgcgacgtcctgcacgacatcgcccgcgccctgctcggcagcgac
cggcagaccgccctggcccggctcgctgatgccttcgaacacgggatggatctgaaacga
ttcatgaacgacctgctcgattgttttcgcagcctgatgctgatccgcatctcgggctgc
gagcacctcatcgaactacccgccgaagaaatcgctctgctggcagaaaccgcccggcag
catagcctggaaaccatccaccagcaactgaacctgctgctgcagacggccgagaccatc
cgccattcttcgcaaccgcggctcgccctggagatcgcttttctctccatcatcgaatcc
ggcaatgtcatcggggtcgagaccctgctcagtcaactggacgaagtgctcggcaagctt
cccgagcccgaaccgccagcgacagccccagcagaatccggcagccggtcggggccgccg
cctgtcgattcacccccggtcaaagcggccgcaccgccacggccgccatcgacaaacgac
ctgcccgccgcaccgccgccatcagccgaaccgccccccgttgcgcccccctcgccggcg
gcagccagggacagcagcagcggccaaccggagaaaacgacaccgccgccaccatcgccg
ggcggaacgaaacagattagaaaggactggctggatttcatcgcctacgtccgcaaccgg
cgggaatggatggcccagaacctgcagcaggccaccgccgtcaaagaacacgggagcgag
ttgaacctggagttcgacaccccggcagagtgcgccttgctgcggagcaaagaaaatcgc
caggcattgactgaatacgtacttgatttttttcagaaagatttcaccatccacatcatc
agcccggaagatccggacgaccccggcgtcgccgttgaagatgggcctaagaagcggcgc
caacagctggctgcccatccgttggtacgcatgaccgaagaaattttcggcggtcaggcc
ggagatatccggatcagtcaacccaatcgttaa
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